HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:53.4 nTPM
HPA Brain:118.6 nTPM
GTEx:53.4 nTPM
FANTOM5:54.6 Scaled Tags Per Million
Pig:44.4 nTPM
Mouse:36.4 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051345
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 118.6
Sample id Sample description nTPM
Hippocampus
nTPM: 105.0
1898 Male, age 80, left hemisphere 123.9
1855 Male, age 76, left hemisphere 113.2
1911 Female, age 85, right hemisphere 105.0
2621 Female, age 67, right hemisphere 100.9
2148 Female, age 91, left hemisphere 96.3
2529 Female, age 94, left hemisphere 90.8
Dentate gyrus
nTPM: 102.5
2530 Female, age 94, left hemisphere 116.4
2010 Male, age 76, both hemispheres 115.3
2246 Female, age 85, both hemispheres 104.5
2528 Male, age 74, both hemispheres 99.7
1927 Female, age 91, both hemispheres 91.5
2531 Female, age 67, both hemispheres 87.5
Entorhinal gyrus
nTPM: 77.4
1938 Female, age 85, left hemisphere 83.7
2613 Female, age 94, left hemisphere 83.2
2764 Male, age 80, right hemisphere 80.0
2117 Female, age 91, right hemisphere 76.4
1787 Male, age 76, left hemisphere 74.5
2686 Male, age 75, right hemisphere 66.9
Hippocampus, CA1
nTPM: 118.6
2749 Male, age 80, left hemisphere 186.0
1873 Female, age 85, both hemispheres 122.1
2527 Male, age 74, both hemispheres 102.5
2045 Male, age 76, both hemispheres 100.7
2082 Female, age 91, right hemisphere 81.9
Hippocampus, CA2
nTPM: 102.6
1963 Male, age 80, left hemisphere 138.8
1892 Male, age 76, both hemispheres 122.5
1940 Female, age 85, left hemisphere 96.4
2249 Male, age 74, both hemispheres 94.1
2437 Female, age 94, left hemisphere 87.5
2113 Female, age 91, right hemisphere 76.4
Hippocampus, CA3
nTPM: 109.2
2137 Male, age 80, left hemisphere 160.1
2620 Female, age 94, left hemisphere 112.9
1867 Male, age 76, both hemispheres 105.5
2861 Female, age 67, both hemispheres 105.0
1891 Female, age 85, both hemispheres 94.5
2436 Male, age 74, both hemispheres 77.2
Parahippocampal cortex
nTPM: 76.3
2018 Male, age 76, both hemispheres 88.0
2245 Female, age 91, both hemispheres 82.5
1850 Male, age 80, both hemispheres 77.8
2692 Male, age 74, both hemispheres 77.5
1933 Female, age 85, both hemispheres 76.5
2622 Female, age 67, right hemisphere 76.4
2532 Female, age 72, left hemisphere 75.3
2693 Female, age 94, both hemispheres 74.3
1990 Female, age 91, right hemisphere 68.0
2250 Female, age 67, right hemisphere 66.6
Perirhinal gyrus
nTPM: 76.2
1794 Male, age 80, right hemisphere 82.2
2521 Female, age 94, right hemisphere 78.0
1847 Female, age 91, left hemisphere 76.2
1841 Female, age 85, right hemisphere 74.3
2848 Male, age 76, right hemisphere 70.0
Subiculum
nTPM: 95.0
1901 Male, age 80, both hemispheres 113.0
2042 Male, age 76, both hemispheres 102.3
2438 Female, age 94, left hemisphere 98.5
1977 Female, age 85, both hemispheres 89.3
2729 Female, age 91, right hemisphere 85.9
2619 Male, age 74, both hemispheres 80.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.4
Samples: 197

Max nTPM: 94.4
Min nTPM: 9.7
Std nTPM: 14.6
Median nTPM: 51.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 94.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 90.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 90.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 85.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 84.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 82.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.1
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 79.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 79.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 78.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 78.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.6
FF:10153-102I9 76 years, female 61.4
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.4
Pig sample Sample description nTPM
Subiculum
nTPM: 25.6
Samples: 4

Max nTPM: 29.8
Min nTPM: 21.4
Sample A Female 29.8
Sample B Female 21.4
Sample C Male 27.4
Sample D Male 23.6
Dorsal hippocampus
nTPM: 44.5
Samples: 4

Max nTPM: 58.5
Min nTPM: 29.6
Sample A Female 58.5
Sample B Female 50.9
Sample C Male 38.8
Sample D Male 29.6
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 30.7
Min nTPM: 23.5
Sample A Female 30.7
Sample B Female 26.2
Sample C Male 26.6
Sample D Male 23.5
Ventral hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 55.9
Min nTPM: 20.8
Sample A Female 31.0
Sample B Female 20.8
Sample C Male 33.4
Sample D Male 55.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 37.5
Min nTPM: 26.9
Sample A Male 26.9
Sample B Male 27.9
Sample C Female 29.5
Sample D Female 37.5
Hippocampal formation
nTPM: 36.4
Samples: 4

Max nTPM: 44.1
Min nTPM: 30.6
Sample A Male 31.7
Sample B Male 39.0
Sample C Female 44.1
Sample D Female 30.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69447822 Antisense, RP_050419_02_B06, Mouse strain C57BL/6J (56 days, male) 5.5
72283797 Antisense, RP_051027_01_B03, Mouse strain C57BL/6J (56 days, male) 2.2

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