HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.0 nTPM
HPA Brain:27.6 nTPM
GTEx:16.0 nTPM
FANTOM5:55.7 Scaled Tags Per Million
Pig:19.1 nTPM
Mouse:26.9 nTPM
Allen mouse:16.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010642
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
2148 Female, age 91, left hemisphere 28.8
1855 Male, age 76, left hemisphere 28.5
2621 Female, age 67, right hemisphere 26.9
2529 Female, age 94, left hemisphere 26.0
1911 Female, age 85, right hemisphere 25.3
1898 Male, age 80, left hemisphere 24.4
Dentate gyrus
nTPM: 25.8
2531 Female, age 67, both hemispheres 28.3
2530 Female, age 94, left hemisphere 27.1
2010 Male, age 76, both hemispheres 25.9
2246 Female, age 85, both hemispheres 25.6
1927 Female, age 91, both hemispheres 24.8
2528 Male, age 74, both hemispheres 23.0
Entorhinal gyrus
nTPM: 25.0
2764 Male, age 80, right hemisphere 27.4
2117 Female, age 91, right hemisphere 26.8
1787 Male, age 76, left hemisphere 25.2
2686 Male, age 75, right hemisphere 23.7
1938 Female, age 85, left hemisphere 23.6
2613 Female, age 94, left hemisphere 23.4
Hippocampus, CA1
nTPM: 25.8
2749 Male, age 80, left hemisphere 27.6
1873 Female, age 85, both hemispheres 26.2
2045 Male, age 76, both hemispheres 25.2
2082 Female, age 91, right hemisphere 25.0
2527 Male, age 74, both hemispheres 24.9
Hippocampus, CA2
nTPM: 25.7
1892 Male, age 76, both hemispheres 29.0
1963 Male, age 80, left hemisphere 27.0
2437 Female, age 94, left hemisphere 26.2
2113 Female, age 91, right hemisphere 24.5
2249 Male, age 74, both hemispheres 23.9
1940 Female, age 85, left hemisphere 23.7
Hippocampus, CA3
nTPM: 27.6
2620 Female, age 94, left hemisphere 33.2
2861 Female, age 67, both hemispheres 29.4
1867 Male, age 76, both hemispheres 27.0
1891 Female, age 85, both hemispheres 26.1
2436 Male, age 74, both hemispheres 25.0
2137 Male, age 80, left hemisphere 24.9
Parahippocampal cortex
nTPM: 24.3
2532 Female, age 72, left hemisphere 26.5
2245 Female, age 91, both hemispheres 26.1
2622 Female, age 67, right hemisphere 25.4
1990 Female, age 91, right hemisphere 24.8
2693 Female, age 94, both hemispheres 24.0
1850 Male, age 80, both hemispheres 23.8
1933 Female, age 85, both hemispheres 23.8
2250 Female, age 67, right hemisphere 23.4
2692 Male, age 74, both hemispheres 23.0
2018 Male, age 76, both hemispheres 22.6
Perirhinal gyrus
nTPM: 24.9
2848 Male, age 76, right hemisphere 26.3
1794 Male, age 80, right hemisphere 26.2
2521 Female, age 94, right hemisphere 25.4
1841 Female, age 85, right hemisphere 23.6
1847 Female, age 91, left hemisphere 23.1
Subiculum
nTPM: 26.6
2729 Female, age 91, right hemisphere 27.7
1901 Male, age 80, both hemispheres 27.3
2042 Male, age 76, both hemispheres 27.1
2438 Female, age 94, left hemisphere 26.7
1977 Female, age 85, both hemispheres 26.1
2619 Male, age 74, both hemispheres 24.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.0
Samples: 197

Max nTPM: 26.2
Min nTPM: 9.0
Std nTPM: 2.6
Median nTPM: 16.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.2
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 23.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 23.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 23.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 22.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 21.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 21.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 21.2
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 21.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 20.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.7
FF:10169-103B7 60 years, female 63.3
FF:10153-102I9 76 years, female 48.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.1
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.7
Sample A Female 18.2
Sample B Female 15.1
Sample C Male 16.0
Sample D Male 14.7
Dorsal hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 21.5
Min nTPM: 17.2
Sample A Female 21.5
Sample B Female 19.2
Sample C Male 18.6
Sample D Male 17.2
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.8
Min nTPM: 16.2
Sample A Female 17.9
Sample B Female 19.8
Sample C Male 17.7
Sample D Male 16.2
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 14.8
Sample A Female 16.9
Sample B Female 14.8
Sample C Male 22.4
Sample D Male 18.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 26.2
Min nTPM: 24.3
Sample A Male 24.8
Sample B Male 24.9
Sample C Female 24.3
Sample D Female 26.2
Hippocampal formation
nTPM: 26.9
Samples: 4

Max nTPM: 29.2
Min nTPM: 25.1
Sample A Male 25.8
Sample B Male 25.1
Sample C Female 29.2
Sample D Female 27.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.1
2153 Antisense, RP_040604_02_B11, Mouse strain C57BL/6J (56 days, male) 16.1
2154 Antisense, RP_040604_02_B11, Mouse strain C57BL/6J (56 days, male) 10.0

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