HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.1 nTPM
HPA Brain:17.6 nTPM
GTEx:14.1 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:2.7 nTPM
Mouse:6.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067395
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 15.8
2148 Female, age 91, left hemisphere 18.6
2621 Female, age 67, right hemisphere 16.6
1911 Female, age 85, right hemisphere 16.2
1898 Male, age 80, left hemisphere 15.3
1855 Male, age 76, left hemisphere 15.1
2529 Female, age 94, left hemisphere 13.2
Dentate gyrus
nTPM: 16.1
1927 Female, age 91, both hemispheres 18.4
2531 Female, age 67, both hemispheres 18.1
2528 Male, age 74, both hemispheres 16.8
2246 Female, age 85, both hemispheres 15.4
2010 Male, age 76, both hemispheres 14.9
2530 Female, age 94, left hemisphere 12.8
Entorhinal gyrus
nTPM: 14.2
2613 Female, age 94, left hemisphere 16.1
2686 Male, age 75, right hemisphere 15.8
1938 Female, age 85, left hemisphere 14.4
1787 Male, age 76, left hemisphere 13.5
2764 Male, age 80, right hemisphere 12.9
2117 Female, age 91, right hemisphere 12.7
Hippocampus, CA1
nTPM: 17.3
2749 Male, age 80, left hemisphere 20.9
2082 Female, age 91, right hemisphere 17.6
2045 Male, age 76, both hemispheres 17.3
1873 Female, age 85, both hemispheres 16.0
2527 Male, age 74, both hemispheres 14.6
Hippocampus, CA2
nTPM: 15.1
1892 Male, age 76, both hemispheres 17.1
2113 Female, age 91, right hemisphere 16.2
1963 Male, age 80, left hemisphere 15.4
2249 Male, age 74, both hemispheres 15.1
1940 Female, age 85, left hemisphere 14.1
2437 Female, age 94, left hemisphere 12.6
Hippocampus, CA3
nTPM: 17.6
2137 Male, age 80, left hemisphere 21.8
2620 Female, age 94, left hemisphere 20.6
2861 Female, age 67, both hemispheres 17.7
1867 Male, age 76, both hemispheres 16.8
2436 Male, age 74, both hemispheres 15.4
1891 Female, age 85, both hemispheres 13.7
Parahippocampal cortex
nTPM: 14.0
2622 Female, age 67, right hemisphere 16.6
2245 Female, age 91, both hemispheres 16.4
2693 Female, age 94, both hemispheres 14.8
1933 Female, age 85, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.7
2018 Male, age 76, both hemispheres 13.5
2692 Male, age 74, both hemispheres 13.4
1850 Male, age 80, both hemispheres 12.9
1990 Female, age 91, right hemisphere 12.5
2532 Female, age 72, left hemisphere 12.4
Perirhinal gyrus
nTPM: 14.2
1847 Female, age 91, left hemisphere 16.3
2521 Female, age 94, right hemisphere 14.1
1794 Male, age 80, right hemisphere 13.9
2848 Male, age 76, right hemisphere 13.7
1841 Female, age 85, right hemisphere 13.2
Subiculum
nTPM: 13.6
2729 Female, age 91, right hemisphere 17.7
2619 Male, age 74, both hemispheres 13.9
1901 Male, age 80, both hemispheres 13.6
2042 Male, age 76, both hemispheres 12.5
1977 Female, age 85, both hemispheres 12.4
2438 Female, age 94, left hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 31.0
Min nTPM: 4.1
Std nTPM: 4.3
Median nTPM: 13.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 31.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 28.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 26.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 25.7
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 23.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 23.5
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 23.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 22.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 22.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 19.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.7
Pig sample Sample description nTPM
Subiculum
nTPM: 2.3
Samples: 4

Max nTPM: 2.3
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 2.3
Sample C Male 2.3
Sample D Male 2.3
Dorsal hippocampus
nTPM: 2.6
Samples: 4

Max nTPM: 3.1
Min nTPM: 1.7
Sample A Female 3.1
Sample B Female 2.8
Sample C Male 2.9
Sample D Male 1.7
Entorhinal cortex
nTPM: 2.2
Samples: 4

Max nTPM: 2.7
Min nTPM: 1.9
Sample A Female 1.9
Sample B Female 2.4
Sample C Male 2.7
Sample D Male 1.9
Ventral hippocampus
nTPM: 2.8
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.9
Sample A Female 2.3
Sample B Female 1.9
Sample C Male 3.5
Sample D Male 3.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 7.7
Min nTPM: 6.5
Sample A Male 6.7
Sample B Male 7.7
Sample C Female 6.5
Sample D Female 6.5
Hippocampal formation
nTPM: 5.9
Samples: 4

Max nTPM: 8.2
Min nTPM: 5.0
Sample A Male 8.2
Sample B Male 5.3
Sample C Female 5.0
Sample D Female 5.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69114968 Antisense, RP_050317_02_D07, Mouse strain C57BL/6J (56 days, male) 0.1

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