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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
23.2
nTPM
HPA Brain:
14.7
nTPM
GTEx:
23.2
nTPM
FANTOM5:
20.8
Scaled Tags Per Million
Pig:
10.8
nTPM
Mouse:
74.9
nTPM
Allen mouse:
2.2
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
23.2
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 23.2
Samples: 197
Max nTPM: 86.3
Min nTPM: 2.0
Std nTPM: 15.4
Median nTPM: 19.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
86.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
84.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
79.1
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
70.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
70.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
66.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
60.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
58.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
57.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
56.1
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
55.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
55.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
49.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
49.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
46.7
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
46.5
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
46.5
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
46.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
44.5
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
43.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
43.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
42.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
41.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
41.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
41.7
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
41.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
41.0
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
41.0
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
39.9
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
38.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
37.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
36.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
36.1
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
35.8
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
35.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
34.2
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
34.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
33.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
32.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
31.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
31.5
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
31.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
31.4
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
31.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
30.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
30.3
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
30.0
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
29.7
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
28.3
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
27.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
27.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
27.1
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
26.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
26.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
26.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
26.2
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
26.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
26.1
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
26.0
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
26.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
25.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
25.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
25.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
25.2
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
24.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
24.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
24.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
24.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
23.6
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
23.6
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
23.5
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
23.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
23.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
23.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
23.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
23.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
23.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
22.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
22.8
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
22.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
22.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
22.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
22.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
21.9
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
21.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
21.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
21.6
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
21.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
21.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
21.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
20.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
20.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
20.1
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
20.1
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
19.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
19.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
19.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
19.5
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
19.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
18.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
18.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
18.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
18.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
18.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
18.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
17.8
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
17.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
17.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
17.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
17.4
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
17.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
17.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
17.0
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
16.4
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
16.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
16.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
16.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
16.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
16.2
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
16.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
16.1
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
16.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
16.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
15.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
15.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
15.4
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
15.1
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
15.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
14.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
14.6
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
14.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
14.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
14.2
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
14.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
14.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
13.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
13.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
13.9
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
13.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
13.8
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
13.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
13.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
13.7
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
13.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
13.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
13.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
13.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
13.3
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
13.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
13.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
12.7
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
12.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
11.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
11.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
11.5
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
11.5
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
11.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
11.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
10.5
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
10.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
10.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
10.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
10.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
10.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
9.8
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
9.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
9.7
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
9.7
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
9.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
9.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
9.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
8.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
8.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
8.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
8.5
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
8.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
8.4
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
8.3
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
8.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
8.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
7.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
7.4
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
7.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
7.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
7.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
6.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
6.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
6.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
6.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
6.6
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
6.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
6.5
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
6.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
5.3
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
5.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
4.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
2.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
74.9
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 68.6
Samples: 4
Max nTPM: 72.1
Min nTPM: 66.0
Sample A
Male
70.0
Sample B
Male
66.0
Sample C
Female
72.1
Sample D
Female
66.4
Hippocampal formation nTPM: 74.9
Samples: 4
Max nTPM: 83.0
Min nTPM: 65.4
Sample A
Male
83.0
Sample B
Male
65.4
Sample C
Female
75.5
Sample D
Female
75.5
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.