HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:8.5 nTPM
HPA Brain:32.6 nTPM
GTEx:8.5 nTPM
FANTOM5:50.6 Scaled Tags Per Million
Pig:147.2 nTPM
Mouse:57.2 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051118
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.6
Sample id Sample description nTPM
Hippocampus
nTPM: 29.5
1898 Male, age 80, left hemisphere 35.8
1911 Female, age 85, right hemisphere 31.4
1855 Male, age 76, left hemisphere 30.3
2148 Female, age 91, left hemisphere 28.9
2529 Female, age 94, left hemisphere 27.7
2621 Female, age 67, right hemisphere 23.1
Dentate gyrus
nTPM: 32.0
1927 Female, age 91, both hemispheres 37.9
2531 Female, age 67, both hemispheres 33.5
2528 Male, age 74, both hemispheres 32.4
2246 Female, age 85, both hemispheres 32.1
2010 Male, age 76, both hemispheres 28.4
2530 Female, age 94, left hemisphere 27.8
Entorhinal gyrus
nTPM: 24.7
1938 Female, age 85, left hemisphere 33.1
2117 Female, age 91, right hemisphere 26.4
1787 Male, age 76, left hemisphere 25.4
2686 Male, age 75, right hemisphere 22.0
2764 Male, age 80, right hemisphere 20.8
2613 Female, age 94, left hemisphere 20.5
Hippocampus, CA1
nTPM: 32.6
1873 Female, age 85, both hemispheres 38.1
2749 Male, age 80, left hemisphere 37.8
2045 Male, age 76, both hemispheres 32.3
2527 Male, age 74, both hemispheres 28.7
2082 Female, age 91, right hemisphere 26.2
Hippocampus, CA2
nTPM: 28.8
1892 Male, age 76, both hemispheres 32.6
1963 Male, age 80, left hemisphere 31.2
2249 Male, age 74, both hemispheres 27.9
1940 Female, age 85, left hemisphere 27.8
2113 Female, age 91, right hemisphere 27.8
2437 Female, age 94, left hemisphere 25.7
Hippocampus, CA3
nTPM: 32.5
2137 Male, age 80, left hemisphere 37.6
2620 Female, age 94, left hemisphere 32.2
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 31.6
2861 Female, age 67, both hemispheres 31.1
2436 Male, age 74, both hemispheres 30.5
Parahippocampal cortex
nTPM: 27.6
2250 Female, age 67, right hemisphere 32.6
1850 Male, age 80, both hemispheres 31.0
1933 Female, age 85, both hemispheres 30.6
2693 Female, age 94, both hemispheres 30.3
1990 Female, age 91, right hemisphere 27.6
2245 Female, age 91, both hemispheres 27.6
2692 Male, age 74, both hemispheres 26.0
2532 Female, age 72, left hemisphere 25.0
2018 Male, age 76, both hemispheres 23.3
2622 Female, age 67, right hemisphere 21.5
Perirhinal gyrus
nTPM: 29.3
1841 Female, age 85, right hemisphere 33.6
1794 Male, age 80, right hemisphere 30.1
2521 Female, age 94, right hemisphere 29.0
2848 Male, age 76, right hemisphere 27.4
1847 Female, age 91, left hemisphere 26.2
Subiculum
nTPM: 25.9
2729 Female, age 91, right hemisphere 29.9
1977 Female, age 85, both hemispheres 29.6
1901 Male, age 80, both hemispheres 27.3
2438 Female, age 94, left hemisphere 26.2
2042 Male, age 76, both hemispheres 23.4
2619 Male, age 74, both hemispheres 19.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.5
Samples: 197

Max nTPM: 26.0
Min nTPM: 4.2
Std nTPM: 3.1
Median nTPM: 7.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 26.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 20.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 19.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 19.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 17.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 17.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 16.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 15.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 15.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 14.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 14.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.6
FF:10153-102I9 76 years, female 62.8
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 147.2
Pig sample Sample description nTPM
Subiculum
nTPM: 85.1
Samples: 4

Max nTPM: 112.4
Min nTPM: 68.7
Sample A Female 112.4
Sample B Female 77.5
Sample C Male 68.7
Sample D Male 81.6
Dorsal hippocampus
nTPM: 147.2
Samples: 4

Max nTPM: 199.0
Min nTPM: 103.3
Sample A Female 199.0
Sample B Female 147.6
Sample C Male 103.3
Sample D Male 139.0
Entorhinal cortex
nTPM: 96.8
Samples: 4

Max nTPM: 113.3
Min nTPM: 76.1
Sample A Female 106.9
Sample B Female 113.3
Sample C Male 90.8
Sample D Male 76.1
Ventral hippocampus
nTPM: 103.7
Samples: 4

Max nTPM: 142.4
Min nTPM: 71.0
Sample A Female 109.5
Sample B Female 91.8
Sample C Male 71.0
Sample D Male 142.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.4
Samples: 4

Max nTPM: 52.0
Min nTPM: 42.4
Sample A Male 43.3
Sample B Male 42.4
Sample C Female 52.0
Sample D Female 48.0
Hippocampal formation
nTPM: 57.3
Samples: 4

Max nTPM: 61.1
Min nTPM: 53.7
Sample A Male 55.0
Sample B Male 59.2
Sample C Female 61.1
Sample D Female 53.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
74822936 Antisense, RP_060321_01_A09, Mouse strain C57BL/6J (56 days, male) 7.0

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