HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.8 nTPM
HPA Brain:42.3 nTPM
GTEx:46.8 nTPM
FANTOM5:85.4 Scaled Tags Per Million
Pig:29.5 nTPM
Mouse:125.3 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031063
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.3
Sample id Sample description nTPM
Hippocampus
nTPM: 36.6
1898 Male, age 80, left hemisphere 50.7
1855 Male, age 76, left hemisphere 38.6
1911 Female, age 85, right hemisphere 35.7
2529 Female, age 94, left hemisphere 33.3
2621 Female, age 67, right hemisphere 31.3
2148 Female, age 91, left hemisphere 30.3
Dentate gyrus
nTPM: 33.5
2010 Male, age 76, both hemispheres 43.4
1927 Female, age 91, both hemispheres 41.3
2246 Female, age 85, both hemispheres 35.3
2530 Female, age 94, left hemisphere 29.9
2528 Male, age 74, both hemispheres 28.5
2531 Female, age 67, both hemispheres 22.7
Entorhinal gyrus
nTPM: 32.3
1938 Female, age 85, left hemisphere 42.6
2117 Female, age 91, right hemisphere 33.9
1787 Male, age 76, left hemisphere 32.4
2764 Male, age 80, right hemisphere 31.7
2686 Male, age 75, right hemisphere 29.7
2613 Female, age 94, left hemisphere 23.4
Hippocampus, CA1
nTPM: 39.6
1873 Female, age 85, both hemispheres 46.5
2749 Male, age 80, left hemisphere 43.3
2045 Male, age 76, both hemispheres 38.5
2527 Male, age 74, both hemispheres 38.5
2082 Female, age 91, right hemisphere 31.3
Hippocampus, CA2
nTPM: 38.4
1892 Male, age 76, both hemispheres 53.8
1963 Male, age 80, left hemisphere 42.7
2249 Male, age 74, both hemispheres 39.2
2113 Female, age 91, right hemisphere 34.5
1940 Female, age 85, left hemisphere 33.3
2437 Female, age 94, left hemisphere 27.2
Hippocampus, CA3
nTPM: 36.5
1867 Male, age 76, both hemispheres 44.6
2137 Male, age 80, left hemisphere 44.2
1891 Female, age 85, both hemispheres 39.9
2436 Male, age 74, both hemispheres 35.7
2620 Female, age 94, left hemisphere 29.2
2861 Female, age 67, both hemispheres 25.3
Parahippocampal cortex
nTPM: 36.1
1850 Male, age 80, both hemispheres 43.8
1933 Female, age 85, both hemispheres 41.1
2250 Female, age 67, right hemisphere 39.4
2018 Male, age 76, both hemispheres 38.7
1990 Female, age 91, right hemisphere 36.3
2245 Female, age 91, both hemispheres 36.2
2532 Female, age 72, left hemisphere 34.7
2692 Male, age 74, both hemispheres 32.3
2693 Female, age 94, both hemispheres 32.0
2622 Female, age 67, right hemisphere 26.1
Perirhinal gyrus
nTPM: 42.3
1841 Female, age 85, right hemisphere 47.1
1847 Female, age 91, left hemisphere 46.7
1794 Male, age 80, right hemisphere 45.4
2521 Female, age 94, right hemisphere 36.8
2848 Male, age 76, right hemisphere 35.4
Subiculum
nTPM: 34.6
1977 Female, age 85, both hemispheres 40.2
1901 Male, age 80, both hemispheres 39.2
2042 Male, age 76, both hemispheres 38.0
2729 Female, age 91, right hemisphere 32.5
2619 Male, age 74, both hemispheres 29.5
2438 Female, age 94, left hemisphere 28.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.8
Samples: 197

Max nTPM: 115.4
Min nTPM: 26.8
Std nTPM: 10.7
Median nTPM: 45.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 115.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 78.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 78.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 77.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 76.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 70.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 70.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 68.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 67.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 67.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 64.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.4
FF:10169-103B7 60 years, female 98.6
FF:10153-102I9 76 years, female 72.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.5
Pig sample Sample description nTPM
Subiculum
nTPM: 25.2
Samples: 4

Max nTPM: 31.3
Min nTPM: 22.8
Sample A Female 31.3
Sample B Female 23.3
Sample C Male 23.2
Sample D Male 22.8
Dorsal hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 32.7
Min nTPM: 27.3
Sample A Female 32.7
Sample B Female 30.5
Sample C Male 27.4
Sample D Male 27.3
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 26.9
Min nTPM: 19.2
Sample A Female 23.6
Sample B Female 26.9
Sample C Male 25.2
Sample D Male 19.2
Ventral hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 27.5
Min nTPM: 19.9
Sample A Female 26.0
Sample B Female 23.8
Sample C Male 19.9
Sample D Male 27.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 125.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.3
Samples: 4

Max nTPM: 126.6
Min nTPM: 113.0
Sample A Male 113.6
Sample B Male 113.0
Sample C Female 126.6
Sample D Female 115.8
Hippocampal formation
nTPM: 125.4
Samples: 4

Max nTPM: 141.4
Min nTPM: 119.5
Sample A Male 141.4
Sample B Male 119.8
Sample C Female 120.7
Sample D Female 119.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68300974 Antisense, RP_041129_02_E07, Mouse strain C57BL/6J (56 days, male) 4.7

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