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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
170.8
nTPM
FANTOM5:
212.3
Scaled Tags Per Million
Pig:
583.5
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
170.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 165.9
2301
Female, age 85, both hemispheres
189.0
2188
Female, age 91, both hemispheres
181.4
2090
Male, age 80, both hemispheres
178.5
1984
Male, age 76, both hemispheres
114.6
Dorsal cochlear nucleus nTPM: 170.3
2378
Male, age 80, both hemispheres
204.1
2187
Female, age 91, both hemispheres
185.6
2802
Male, age 74, right hemisphere
173.1
2370
Male, age 61, both hemispheres
165.3
2058
Male, age 76, both hemispheres
123.1
Dorsal tegmental nucleus nTPM: 170.8
2358
Male, age 61, both hemispheres
220.1
2083
Male, age 80, both hemispheres
165.7
2326
Male, age 74, both hemispheres
164.2
1936
Male, age 76, left hemisphere
133.0
Dorsolateral tegmental area nTPM: 167.8
2654
Male, age 80, both hemispheres
198.2
2337
Male, age 61, both hemispheres
190.0
2360
Male, age 74, both hemispheres
154.8
2141
Male, age 76, both hemispheres
148.4
2751
Female, age 85, both hemispheres
147.5
Kolliker-Fuse nucleus nTPM: 168.2
2793
Female, age 91, left hemisphere
189.2
2315
Male, age 76, right hemisphere
166.1
2163
Male, age 80, both hemispheres
149.3
Lateral lemniscal nuclei nTPM: 138.8
2169
Male, age 76, both hemispheres
160.3
2320
Female, age 91, left hemisphere
147.7
2746
Female, age 85, left hemisphere
141.3
2453
Male, age 74, right hemisphere
126.1
2036
Male, age 80, both hemispheres
118.8
Lateral parabrachial nucleus nTPM: 168.3
2792
Male, age 76, both hemispheres
202.4
2013
Male, age 80, both hemispheres
172.8
2139
Female, age 85, right hemisphere
162.0
2790
Male, age 61, both hemispheres
136.1
Lateral vestibular nucleus nTPM: 161.1
2311
Male, age 80, both hemispheres
189.3
2184
Male, age 76, both hemispheres
132.8
Locus coeruleus nTPM: 142.8
2720
Male, age 74, both hemispheres
174.3
2162
Male, age 80, both hemispheres
156.6
2788
Male, age 74, unknown
149.7
2123
Female, age 91, both hemispheres
140.1
2014
Male, age 55, unknown
135.8
2317
Female, age 72, unknown
126.5
1980
Male, age 76, both hemispheres
116.6
Medial parabrachial nucleus nTPM: 163.2
2170
Female, age 91, both hemispheres
192.5
2854
Male, age 80, both hemispheres
169.9
2786
Male, age 76, both hemispheres
159.7
2463
Female, age 85, right hemisphere
152.5
2156
Male, age 61, both hemispheres
141.3
Medial periolivary nuclei nTPM: 150.0
2458
Female, age 91, both hemispheres
170.0
2063
Male, age 76, both hemispheres
159.1
2081
Male, age 80, both hemispheres
158.4
2171
Female, age 85, both hemispheres
138.9
2791
Male, age 74, right hemisphere
123.7
Motor facial nucleus nTPM: 148.3
2697
Female, age 85, both hemispheres
180.4
2795
Female, age 91, both hemispheres
151.7
2365
Male, age 74, right hemisphere
151.5
2062
Male, age 76, both hemispheres
137.8
2126
Male, age 61, both hemispheres
135.6
2327
Male, age 80, both hemispheres
132.8
Motor trigeminal nucleus nTPM: 154.3
2321
Female, age 91, both hemispheres
168.3
2560
Male, age 74, both hemispheres
162.7
2335
Male, age 61, both hemispheres
160.5
2309
Male, age 76, both hemispheres
150.3
2079
Male, age 80, both hemispheres
129.7
Nuclei of the trapezoid body nTPM: 145.5
1983
Male, age 76, both hemispheres
170.4
2166
Male, age 80, both hemispheres
148.7
2159
Male, age 61, both hemispheres
146.1
2368
Female, age 91, both hemispheres
140.8
2735
Female, age 85, both hemispheres
121.4
Nucleus raphe magnus nTPM: 145.1
2051
Male, age 76, both hemispheres
168.7
2459
Female, age 91, both hemispheres
158.0
2328
Male, age 80, both hemispheres
140.1
2160
Male, age 61, both hemispheres
138.1
2172
Female, age 85, both hemispheres
134.0
2455
Male, age 74, both hemispheres
131.7
Paramedian reticular nucleus nTPM: 147.4
2052
Male, age 76, both hemispheres
174.4
2050
Female, age 85, both hemispheres
154.7
2313
Male, age 61, both hemispheres
130.9
2057
Male, age 80, both hemispheres
129.7
Pedunculopontine tegmental nucleus nTPM: 158.4
2338
Male, age 61, both hemispheres
201.6
2334
Male, age 80, both hemispheres
154.1
1921
Female, age 85, both hemispheres
119.4
Pontine nuclei nTPM: 151.2
2115
Male, age 80, left hemisphere
172.6
2319
Female, age 91, both hemispheres
164.0
2787
Female, age 85, both hemispheres
163.5
1968
Male, age 76, left hemisphere
151.0
2454
Male, age 74, left hemisphere
150.1
1863
Male, age 55, unknown
147.5
2109
Female, age 72, unknown
132.4
2727
Male, age 61, right hemisphere
128.6
Pontine raphe nucleus nTPM: 144.1
2853
Male, age 76, midline
161.7
2122
Female, age 85, midline
126.5
Posteroventral cochlear nucleus nTPM: 170.7
2135
Female, age 91, both hemispheres
193.6
2341
Male, age 80, both hemispheres
184.1
2371
Male, age 61, both hemispheres
183.4
2070
Male, age 76, both hemispheres
154.6
2752
Female, age 85, both hemispheres
137.7
Principal sensory trigeminal nucleus nTPM: 151.6
2367
Female, age 91, left hemisphere
170.6
2158
Male, age 61, both hemispheres
170.1
2324
Male, age 76, both hemispheres
140.8
2008
Male, age 80, left hemisphere
124.9
Reticular pontine nucleus, caudal nTPM: 155.8
2457
Female, age 91, both hemispheres
185.7
2092
Male, age 76, both hemispheres
162.0
2559
Male, age 74, both hemispheres
144.2
2332
Male, age 80, right hemisphere
131.3
Reticular pontine nucleus, oral nTPM: 168.4
2361
Male, age 74, both hemispheres
225.8
2366
Female, age 91, both hemispheres
171.6
2167
Male, age 76, both hemispheres
157.5
2012
Female, age 85, both hemispheres
146.1
1939
Male, age 80, both hemispheres
140.9
Reticulotegmental nucleus nTPM: 152.2
2322
Female, age 91, both hemispheres
170.7
2452
Male, age 74, both hemispheres
164.9
2333
Male, age 80, both hemispheres
138.0
2325
Male, age 76, both hemispheres
135.1
Spinal trigeminal nucleus, oral nTPM: 135.1
2164
Male, age 80, both hemispheres
153.0
1978
Male, age 76, both hemispheres
130.5
2737
Female, age 85, both hemispheres
121.9
Subcoeruleus area nTPM: 149.1
2369
Female, age 85, left hemisphere
174.5
2451
Male, age 74, both hemispheres
163.0
2323
Female, age 91, left hemisphere
138.2
2089
Male, age 76, left hemisphere
135.4
1958
Male, age 80, both hemispheres
134.2
Superior olive nTPM: 153.5
2020
Male, age 76, both hemispheres
169.1
2561
Female, age 91, both hemispheres
168.7
2364
Male, age 74, right hemisphere
157.9
2329
Male, age 80, right hemisphere
140.5
1875
Female, age 85, both hemispheres
131.0
Ventral periolivary nuclei nTPM: 151.0
2023
Male, age 76, both hemispheres
168.0
2794
Female, age 91, left hemisphere
154.6
2130
Female, age 85, both hemispheres
151.7
2165
Male, age 80, both hemispheres
129.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 150.1
2161
Male, age 80, both hemispheres
172.9
2359
Male, age 61, both hemispheres
166.9
2840
Female, age 85, both hemispheres
153.9
2456
Female, age 91, both hemispheres
151.1
2449
Male, age 74, both hemispheres
131.0
1959
Male, age 76, both hemispheres
124.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
