HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:114.3 nTPM
HPA Brain:97.5 nTPM
GTEx:114.3 nTPM
FANTOM5:119.1 Scaled Tags Per Million
Pig:92.3 nTPM
Mouse:131.2 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002997
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.5
Sample id Sample description nTPM
Hippocampus
nTPM: 97.5
1898 Male, age 80, left hemisphere 110.5
2529 Female, age 94, left hemisphere 100.4
2621 Female, age 67, right hemisphere 99.2
1855 Male, age 76, left hemisphere 94.9
2148 Female, age 91, left hemisphere 94.8
1911 Female, age 85, right hemisphere 85.6
Dentate gyrus
nTPM: 91.2
2530 Female, age 94, left hemisphere 110.2
2010 Male, age 76, both hemispheres 93.9
2528 Male, age 74, both hemispheres 88.4
2246 Female, age 85, both hemispheres 85.8
1927 Female, age 91, both hemispheres 84.8
2531 Female, age 67, both hemispheres 84.0
Entorhinal gyrus
nTPM: 90.6
2117 Female, age 91, right hemisphere 101.5
2764 Male, age 80, right hemisphere 96.7
1938 Female, age 85, left hemisphere 90.4
2686 Male, age 75, right hemisphere 89.6
1787 Male, age 76, left hemisphere 85.3
2613 Female, age 94, left hemisphere 80.4
Hippocampus, CA1
nTPM: 87.8
2749 Male, age 80, left hemisphere 100.5
2527 Male, age 74, both hemispheres 91.4
1873 Female, age 85, both hemispheres 88.2
2082 Female, age 91, right hemisphere 82.8
2045 Male, age 76, both hemispheres 76.0
Hippocampus, CA2
nTPM: 92.0
1963 Male, age 80, left hemisphere 105.1
2437 Female, age 94, left hemisphere 96.6
1892 Male, age 76, both hemispheres 94.4
2113 Female, age 91, right hemisphere 89.6
2249 Male, age 74, both hemispheres 88.5
1940 Female, age 85, left hemisphere 77.6
Hippocampus, CA3
nTPM: 90.3
2861 Female, age 67, both hemispheres 101.2
1867 Male, age 76, both hemispheres 92.7
2137 Male, age 80, left hemisphere 92.7
2436 Male, age 74, both hemispheres 92.3
1891 Female, age 85, both hemispheres 85.1
2620 Female, age 94, left hemisphere 77.6
Parahippocampal cortex
nTPM: 83.1
2692 Male, age 74, both hemispheres 94.8
2245 Female, age 91, both hemispheres 92.7
1850 Male, age 80, both hemispheres 85.7
2622 Female, age 67, right hemisphere 85.5
2532 Female, age 72, left hemisphere 83.2
2018 Male, age 76, both hemispheres 82.1
2250 Female, age 67, right hemisphere 80.8
1990 Female, age 91, right hemisphere 80.7
1933 Female, age 85, both hemispheres 78.8
2693 Female, age 94, both hemispheres 67.2
Perirhinal gyrus
nTPM: 78.1
1847 Female, age 91, left hemisphere 86.9
1794 Male, age 80, right hemisphere 86.4
1841 Female, age 85, right hemisphere 76.8
2521 Female, age 94, right hemisphere 72.6
2848 Male, age 76, right hemisphere 67.8
Subiculum
nTPM: 94.1
1901 Male, age 80, both hemispheres 100.1
2438 Female, age 94, left hemisphere 99.9
2619 Male, age 74, both hemispheres 95.9
2042 Male, age 76, both hemispheres 93.6
1977 Female, age 85, both hemispheres 88.4
2729 Female, age 91, right hemisphere 86.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 114.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.3
Samples: 197

Max nTPM: 195.9
Min nTPM: 64.4
Std nTPM: 22.1
Median nTPM: 110.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 195.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 184.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 169.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 163.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 162.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 162.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 161.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 160.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 159.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 155.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 153.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.1
FF:10169-103B7 60 years, female 119.4
FF:10153-102I9 76 years, female 118.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.3
Pig sample Sample description nTPM
Subiculum
nTPM: 80.0
Samples: 4

Max nTPM: 110.3
Min nTPM: 69.3
Sample A Female 110.3
Sample B Female 70.3
Sample C Male 69.3
Sample D Male 70.1
Dorsal hippocampus
nTPM: 92.4
Samples: 4

Max nTPM: 116.2
Min nTPM: 65.7
Sample A Female 116.2
Sample B Female 82.8
Sample C Male 104.7
Sample D Male 65.7
Entorhinal cortex
nTPM: 87.4
Samples: 4

Max nTPM: 99.9
Min nTPM: 75.5
Sample A Female 85.3
Sample B Female 88.9
Sample C Male 99.9
Sample D Male 75.5
Ventral hippocampus
nTPM: 86.7
Samples: 4

Max nTPM: 111.6
Min nTPM: 61.8
Sample A Female 81.9
Sample B Female 61.8
Sample C Male 111.6
Sample D Male 91.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 126.7
Samples: 4

Max nTPM: 135.5
Min nTPM: 118.7
Sample A Male 118.7
Sample B Male 127.8
Sample C Female 135.5
Sample D Female 124.7
Hippocampal formation
nTPM: 131.2
Samples: 4

Max nTPM: 140.2
Min nTPM: 114.5
Sample A Male 140.2
Sample B Male 114.5
Sample C Female 139.1
Sample D Female 130.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
72283773 Antisense, RP_051019_02_B04, Mouse strain C57BL/6J (56 days, male) 11.4
74736207 Antisense, RP_060302_02_E06, Mouse strain C57BL/6J (56 days, male) 1.4

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