HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:139.9 nTPM
HPA Brain:293.3 nTPM
GTEx:139.9 nTPM
FANTOM5:217.7 Scaled Tags Per Million
Pig:58.7 nTPM
Mouse:59.3 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068771
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 293.3
Sample id Sample description nTPM
Hippocampus
nTPM: 181.7
1911 Female, age 85, right hemisphere 227.7
2529 Female, age 94, left hemisphere 210.6
2621 Female, age 67, right hemisphere 195.3
1898 Male, age 80, left hemisphere 160.3
1855 Male, age 76, left hemisphere 157.2
2148 Female, age 91, left hemisphere 139.1
Dentate gyrus
nTPM: 187.6
2530 Female, age 94, left hemisphere 301.4
2010 Male, age 76, both hemispheres 210.2
2528 Male, age 74, both hemispheres 177.9
2246 Female, age 85, both hemispheres 168.8
2531 Female, age 67, both hemispheres 147.8
1927 Female, age 91, both hemispheres 119.7
Entorhinal gyrus
nTPM: 210.9
2117 Female, age 91, right hemisphere 331.6
2764 Male, age 80, right hemisphere 224.7
2686 Male, age 75, right hemisphere 198.1
1938 Female, age 85, left hemisphere 178.1
2613 Female, age 94, left hemisphere 175.2
1787 Male, age 76, left hemisphere 157.6
Hippocampus, CA1
nTPM: 141.6
2527 Male, age 74, both hemispheres 190.5
2082 Female, age 91, right hemisphere 169.6
1873 Female, age 85, both hemispheres 163.9
2749 Male, age 80, left hemisphere 120.6
2045 Male, age 76, both hemispheres 63.3
Hippocampus, CA2
nTPM: 192.2
1963 Male, age 80, left hemisphere 243.6
2249 Male, age 74, both hemispheres 217.9
2113 Female, age 91, right hemisphere 193.8
2437 Female, age 94, left hemisphere 193.5
1940 Female, age 85, left hemisphere 179.7
1892 Male, age 76, both hemispheres 124.6
Hippocampus, CA3
nTPM: 141.2
1891 Female, age 85, both hemispheres 310.0
1867 Male, age 76, both hemispheres 166.0
2436 Male, age 74, both hemispheres 127.3
2137 Male, age 80, left hemisphere 88.0
2861 Female, age 67, both hemispheres 83.1
2620 Female, age 94, left hemisphere 72.6
Parahippocampal cortex
nTPM: 176.3
2692 Male, age 74, both hemispheres 254.6
2532 Female, age 72, left hemisphere 227.6
1990 Female, age 91, right hemisphere 226.2
2018 Male, age 76, both hemispheres 192.8
1850 Male, age 80, both hemispheres 189.4
2245 Female, age 91, both hemispheres 167.7
1933 Female, age 85, both hemispheres 159.7
2693 Female, age 94, both hemispheres 134.7
2250 Female, age 67, right hemisphere 115.3
2622 Female, age 67, right hemisphere 94.8
Perirhinal gyrus
nTPM: 122.6
2848 Male, age 76, right hemisphere 137.8
2521 Female, age 94, right hemisphere 123.7
1847 Female, age 91, left hemisphere 121.3
1794 Male, age 80, right hemisphere 120.8
1841 Female, age 85, right hemisphere 109.4
Subiculum
nTPM: 293.3
2042 Male, age 76, both hemispheres 430.6
1901 Male, age 80, both hemispheres 339.4
2438 Female, age 94, left hemisphere 322.8
1977 Female, age 85, both hemispheres 265.1
2619 Male, age 74, both hemispheres 215.3
2729 Female, age 91, right hemisphere 186.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 139.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 139.9
Samples: 197

Max nTPM: 568.8
Min nTPM: 26.0
Std nTPM: 83.5
Median nTPM: 116.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 568.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 377.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 375.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 375.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 369.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 360.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 333.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 330.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 325.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 318.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 314.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 217.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 217.7
FF:10153-102I9 76 years, female 258.9
FF:10169-103B7 60 years, female 176.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.7
Pig sample Sample description nTPM
Subiculum
nTPM: 27.0
Samples: 4

Max nTPM: 30.3
Min nTPM: 24.1
Sample A Female 28.9
Sample B Female 30.3
Sample C Male 24.1
Sample D Male 24.8
Dorsal hippocampus
nTPM: 58.7
Samples: 4

Max nTPM: 87.4
Min nTPM: 29.2
Sample A Female 87.4
Sample B Female 48.9
Sample C Male 69.3
Sample D Male 29.2
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 30.6
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 30.6
Sample C Male 21.3
Sample D Male 22.8
Ventral hippocampus
nTPM: 40.7
Samples: 4

Max nTPM: 54.6
Min nTPM: 25.5
Sample A Female 45.1
Sample B Female 25.5
Sample C Male 37.4
Sample D Male 54.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 50.9
Min nTPM: 47.0
Sample A Male 50.9
Sample B Male 49.6
Sample C Female 47.0
Sample D Female 48.9
Hippocampal formation
nTPM: 59.3
Samples: 4

Max nTPM: 76.7
Min nTPM: 50.4
Sample A Male 54.3
Sample B Male 55.8
Sample C Female 76.7
Sample D Female 50.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
75146004 Antisense, RP_060220_02_B10, Mouse strain C57BL/6J (56 days, male) 5.8
564654 Antisense, RP_040826_01_B12, Mouse strain C57BL/6J (56 days, male) 4.2

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