HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.7 nTPM
HPA Brain:64.2 nTPM
GTEx:13.7 nTPM
FANTOM5:51.2 Scaled Tags Per Million
Pig:57.8 nTPM
Mouse:100.3 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014765Antibody HPA016487
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.2
Sample id Sample description nTPM
Hippocampus
nTPM: 32.7
2621 Female, age 67, right hemisphere 47.5
1911 Female, age 85, right hemisphere 37.7
1898 Male, age 80, left hemisphere 35.5
2529 Female, age 94, left hemisphere 27.1
1855 Male, age 76, left hemisphere 26.4
2148 Female, age 91, left hemisphere 21.8
Dentate gyrus
nTPM: 28.2
1927 Female, age 91, both hemispheres 44.3
2010 Male, age 76, both hemispheres 34.5
2530 Female, age 94, left hemisphere 32.5
2246 Female, age 85, both hemispheres 24.6
2531 Female, age 67, both hemispheres 19.1
2528 Male, age 74, both hemispheres 14.2
Entorhinal gyrus
nTPM: 45.1
2764 Male, age 80, right hemisphere 56.7
1938 Female, age 85, left hemisphere 51.6
2613 Female, age 94, left hemisphere 49.8
2686 Male, age 75, right hemisphere 43.3
1787 Male, age 76, left hemisphere 36.2
2117 Female, age 91, right hemisphere 33.0
Hippocampus, CA1
nTPM: 50.2
2749 Male, age 80, left hemisphere 126.9
2527 Male, age 74, both hemispheres 40.9
1873 Female, age 85, both hemispheres 34.0
2082 Female, age 91, right hemisphere 33.7
2045 Male, age 76, both hemispheres 15.7
Hippocampus, CA2
nTPM: 42.1
1963 Male, age 80, left hemisphere 54.0
2113 Female, age 91, right hemisphere 43.6
1892 Male, age 76, both hemispheres 43.5
1940 Female, age 85, left hemisphere 39.8
2249 Male, age 74, both hemispheres 36.4
2437 Female, age 94, left hemisphere 35.1
Hippocampus, CA3
nTPM: 46.6
2137 Male, age 80, left hemisphere 108.8
2436 Male, age 74, both hemispheres 45.1
1867 Male, age 76, both hemispheres 44.5
1891 Female, age 85, both hemispheres 31.8
2861 Female, age 67, both hemispheres 27.2
2620 Female, age 94, left hemisphere 22.3
Parahippocampal cortex
nTPM: 48.1
1850 Male, age 80, both hemispheres 64.5
2693 Female, age 94, both hemispheres 61.3
2245 Female, age 91, both hemispheres 61.0
2532 Female, age 72, left hemisphere 55.1
2622 Female, age 67, right hemisphere 51.2
1933 Female, age 85, both hemispheres 49.6
1990 Female, age 91, right hemisphere 40.1
2018 Male, age 76, both hemispheres 38.1
2250 Female, age 67, right hemisphere 33.2
2692 Male, age 74, both hemispheres 26.5
Perirhinal gyrus
nTPM: 64.2
1841 Female, age 85, right hemisphere 79.4
2848 Male, age 76, right hemisphere 77.0
1794 Male, age 80, right hemisphere 71.8
1847 Female, age 91, left hemisphere 50.0
2521 Female, age 94, right hemisphere 43.0
Subiculum
nTPM: 36.9
1901 Male, age 80, both hemispheres 56.7
1977 Female, age 85, both hemispheres 42.6
2042 Male, age 76, both hemispheres 40.6
2438 Female, age 94, left hemisphere 37.9
2619 Male, age 74, both hemispheres 24.3
2729 Female, age 91, right hemisphere 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 54.2
Min nTPM: 1.1
Std nTPM: 9.5
Median nTPM: 11.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 54.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 53.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 51.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 42.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 32.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 31.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 31.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 30.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 30.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.2
FF:10153-102I9 76 years, female 51.6
FF:10169-103B7 60 years, female 50.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.8
Pig sample Sample description nTPM
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.2
Sample A Female 24.7
Sample B Female 16.2
Sample C Male 26.7
Sample D Male 25.2
Dorsal hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 56.6
Min nTPM: 33.2
Sample A Female 56.6
Sample B Female 52.5
Sample C Male 45.9
Sample D Male 33.2
Entorhinal cortex
nTPM: 57.8
Samples: 4

Max nTPM: 70.9
Min nTPM: 43.0
Sample A Female 61.7
Sample B Female 70.9
Sample C Male 55.5
Sample D Male 43.0
Ventral hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 61.8
Min nTPM: 29.0
Sample A Female 50.2
Sample B Female 29.0
Sample C Male 47.5
Sample D Male 61.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.3
Samples: 4

Max nTPM: 112.7
Min nTPM: 85.9
Sample A Male 112.7
Sample B Male 105.1
Sample C Female 97.5
Sample D Female 85.9
Hippocampal formation
nTPM: 75.6
Samples: 4

Max nTPM: 83.6
Min nTPM: 66.5
Sample A Male 66.5
Sample B Male 83.6
Sample C Female 77.5
Sample D Female 74.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
69201606 Antisense, RP_050317_03_C04, Mouse strain C57BL/6J (56 days, male) 10.4
72119596 Antisense, RP_051017_04_A10, Mouse strain C57BL/6J (56 days, male) 6.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org