HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:23.8 nTPM
HPA Brain:168.6 nTPM
GTEx:23.8 nTPM
FANTOM5:128.1 Scaled Tags Per Million
Pig:468.4 nTPM
Mouse:456.8 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061006
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 168.6
Sample id Sample description nTPM
Hippocampus
nTPM: 60.5
1898 Male, age 80, left hemisphere 77.8
2529 Female, age 94, left hemisphere 77.0
2621 Female, age 67, right hemisphere 70.8
1911 Female, age 85, right hemisphere 56.2
1855 Male, age 76, left hemisphere 44.2
2148 Female, age 91, left hemisphere 37.1
Dentate gyrus
nTPM: 61.4
2530 Female, age 94, left hemisphere 85.8
2246 Female, age 85, both hemispheres 75.5
2528 Male, age 74, both hemispheres 62.1
2531 Female, age 67, both hemispheres 51.6
2010 Male, age 76, both hemispheres 49.7
1927 Female, age 91, both hemispheres 43.9
Entorhinal gyrus
nTPM: 145.8
2764 Male, age 80, right hemisphere 184.8
2613 Female, age 94, left hemisphere 156.6
1938 Female, age 85, left hemisphere 150.8
1787 Male, age 76, left hemisphere 145.1
2686 Male, age 75, right hemisphere 136.5
2117 Female, age 91, right hemisphere 101.3
Hippocampus, CA1
nTPM: 74.3
2082 Female, age 91, right hemisphere 101.1
2749 Male, age 80, left hemisphere 98.0
2527 Male, age 74, both hemispheres 72.5
2045 Male, age 76, both hemispheres 53.2
1873 Female, age 85, both hemispheres 47.0
Hippocampus, CA2
nTPM: 89.5
2437 Female, age 94, left hemisphere 111.3
1940 Female, age 85, left hemisphere 106.7
1892 Male, age 76, both hemispheres 98.3
2113 Female, age 91, right hemisphere 94.0
2249 Male, age 74, both hemispheres 79.9
1963 Male, age 80, left hemisphere 46.5
Hippocampus, CA3
nTPM: 80.9
1867 Male, age 76, both hemispheres 108.2
2137 Male, age 80, left hemisphere 88.7
1891 Female, age 85, both hemispheres 86.0
2436 Male, age 74, both hemispheres 81.0
2861 Female, age 67, both hemispheres 64.2
2620 Female, age 94, left hemisphere 57.0
Parahippocampal cortex
nTPM: 137.6
2250 Female, age 67, right hemisphere 168.3
2245 Female, age 91, both hemispheres 164.5
1850 Male, age 80, both hemispheres 152.7
1990 Female, age 91, right hemisphere 152.4
1933 Female, age 85, both hemispheres 146.4
2532 Female, age 72, left hemisphere 134.9
2693 Female, age 94, both hemispheres 134.0
2018 Male, age 76, both hemispheres 130.4
2622 Female, age 67, right hemisphere 116.8
2692 Male, age 74, both hemispheres 75.5
Perirhinal gyrus
nTPM: 168.6
1847 Female, age 91, left hemisphere 215.0
2521 Female, age 94, right hemisphere 192.4
2848 Male, age 76, right hemisphere 149.2
1794 Male, age 80, right hemisphere 147.4
1841 Female, age 85, right hemisphere 139.0
Subiculum
nTPM: 99.7
1977 Female, age 85, both hemispheres 163.8
2619 Male, age 74, both hemispheres 112.5
2438 Female, age 94, left hemisphere 103.4
1901 Male, age 80, both hemispheres 102.6
2042 Male, age 76, both hemispheres 72.7
2729 Female, age 91, right hemisphere 43.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.8
Samples: 197

Max nTPM: 119.0
Min nTPM: 2.7
Std nTPM: 21.7
Median nTPM: 15.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 119.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 98.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 87.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 87.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 82.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 82.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 80.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 76.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 70.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 69.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.1
FF:10153-102I9 76 years, female 139.8
FF:10169-103B7 60 years, female 116.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 468.4
Pig sample Sample description nTPM
Subiculum
nTPM: 423.5
Samples: 4

Max nTPM: 619.2
Min nTPM: 311.1
Sample A Female 619.2
Sample B Female 411.0
Sample C Male 352.6
Sample D Male 311.1
Dorsal hippocampus
nTPM: 255.9
Samples: 4

Max nTPM: 326.4
Min nTPM: 142.5
Sample A Female 325.4
Sample B Female 229.2
Sample C Male 326.4
Sample D Male 142.5
Entorhinal cortex
nTPM: 468.4
Samples: 4

Max nTPM: 580.3
Min nTPM: 377.2
Sample A Female 425.5
Sample B Female 580.3
Sample C Male 490.5
Sample D Male 377.2
Ventral hippocampus
nTPM: 316.2
Samples: 4

Max nTPM: 410.5
Min nTPM: 239.5
Sample A Female 327.4
Sample B Female 239.5
Sample C Male 410.5
Sample D Male 287.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 456.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 456.8
Samples: 4

Max nTPM: 510.4
Min nTPM: 403.2
Sample A Male 473.9
Sample B Male 510.4
Sample C Female 403.2
Sample D Female 439.6
Hippocampal formation
nTPM: 302.3
Samples: 4

Max nTPM: 377.0
Min nTPM: 270.2
Sample A Male 377.0
Sample B Male 279.1
Sample C Female 283.0
Sample D Female 270.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
71358557 Antisense, RP_050725_03_E06, Mouse strain C57BL/6J (56 days, male) 7.8
68798938 Antisense, RP_050217_01_F04, Mouse strain C57BL/6J (56 days, male) 5.8

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