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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
189.2
nTPM
FANTOM5:
225.9
Scaled Tags Per Million
Pig:
291.5
nTPM
Allen mouse:
6.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
189.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 108.4
2301
Female, age 85, both hemispheres
126.2
1984
Male, age 76, both hemispheres
116.3
2188
Female, age 91, both hemispheres
101.1
2090
Male, age 80, both hemispheres
90.0
Dorsal cochlear nucleus nTPM: 113.0
2058
Male, age 76, both hemispheres
132.4
2802
Male, age 74, right hemisphere
117.9
2378
Male, age 80, both hemispheres
108.9
2187
Female, age 91, both hemispheres
105.2
2370
Male, age 61, both hemispheres
100.4
Dorsal tegmental nucleus nTPM: 116.2
2083
Male, age 80, both hemispheres
135.4
2326
Male, age 74, both hemispheres
135.0
1936
Male, age 76, left hemisphere
116.8
2358
Male, age 61, both hemispheres
77.8
Dorsolateral tegmental area nTPM: 111.0
2141
Male, age 76, both hemispheres
145.4
2654
Male, age 80, both hemispheres
129.8
2751
Female, age 85, both hemispheres
121.2
2360
Male, age 74, both hemispheres
103.7
2337
Male, age 61, both hemispheres
55.0
Kolliker-Fuse nucleus nTPM: 103.3
2315
Male, age 76, right hemisphere
109.0
2163
Male, age 80, both hemispheres
101.2
2793
Female, age 91, left hemisphere
99.9
Lateral lemniscal nuclei nTPM: 170.8
2169
Male, age 76, both hemispheres
226.2
2036
Male, age 80, both hemispheres
180.9
2453
Male, age 74, right hemisphere
174.9
2746
Female, age 85, left hemisphere
160.0
2320
Female, age 91, left hemisphere
111.7
Lateral parabrachial nucleus nTPM: 111.1
2139
Female, age 85, right hemisphere
176.8
2013
Male, age 80, both hemispheres
105.6
2790
Male, age 61, both hemispheres
93.5
2792
Male, age 76, both hemispheres
68.3
Lateral vestibular nucleus nTPM: 116.5
2184
Male, age 76, both hemispheres
127.0
2311
Male, age 80, both hemispheres
106.0
Locus coeruleus nTPM: 133.6
2014
Male, age 55, unknown
161.7
1980
Male, age 76, both hemispheres
144.5
2162
Male, age 80, both hemispheres
144.5
2123
Female, age 91, both hemispheres
136.8
2317
Female, age 72, unknown
130.1
2788
Male, age 74, unknown
113.3
2720
Male, age 74, both hemispheres
104.7
Medial parabrachial nucleus nTPM: 103.4
2170
Female, age 91, both hemispheres
116.0
2786
Male, age 76, both hemispheres
115.9
2854
Male, age 80, both hemispheres
108.4
2156
Male, age 61, both hemispheres
106.4
2463
Female, age 85, right hemisphere
70.0
Medial periolivary nuclei nTPM: 141.2
2063
Male, age 76, both hemispheres
221.2
2171
Female, age 85, both hemispheres
201.8
2458
Female, age 91, both hemispheres
100.4
2791
Male, age 74, right hemisphere
93.6
2081
Male, age 80, both hemispheres
88.6
Motor facial nucleus nTPM: 151.4
2062
Male, age 76, both hemispheres
254.7
2327
Male, age 80, both hemispheres
173.7
2697
Female, age 85, both hemispheres
140.8
2365
Male, age 74, right hemisphere
130.9
2126
Male, age 61, both hemispheres
112.2
2795
Female, age 91, both hemispheres
95.9
Motor trigeminal nucleus nTPM: 125.0
2560
Male, age 74, both hemispheres
142.8
2079
Male, age 80, both hemispheres
132.4
2309
Male, age 76, both hemispheres
132.2
2321
Female, age 91, both hemispheres
110.1
2335
Male, age 61, both hemispheres
107.4
Nuclei of the trapezoid body nTPM: 173.4
1983
Male, age 76, both hemispheres
224.5
2735
Female, age 85, both hemispheres
216.0
2159
Male, age 61, both hemispheres
179.6
2166
Male, age 80, both hemispheres
127.5
2368
Female, age 91, both hemispheres
119.5
Nucleus raphe magnus nTPM: 168.3
2172
Female, age 85, both hemispheres
224.8
2051
Male, age 76, both hemispheres
180.4
2160
Male, age 61, both hemispheres
177.9
2455
Male, age 74, both hemispheres
170.2
2328
Male, age 80, both hemispheres
149.5
2459
Female, age 91, both hemispheres
107.1
Paramedian reticular nucleus nTPM: 153.4
2050
Female, age 85, both hemispheres
215.1
2313
Male, age 61, both hemispheres
147.7
2057
Male, age 80, both hemispheres
139.7
2052
Male, age 76, both hemispheres
111.2
Pedunculopontine tegmental nucleus nTPM: 109.6
2334
Male, age 80, both hemispheres
137.8
1921
Female, age 85, both hemispheres
99.1
2338
Male, age 61, both hemispheres
92.1
Pontine nuclei nTPM: 156.8
1863
Male, age 55, unknown
252.5
2787
Female, age 85, both hemispheres
185.5
1968
Male, age 76, left hemisphere
172.0
2727
Male, age 61, right hemisphere
159.7
2109
Female, age 72, unknown
159.4
2454
Male, age 74, left hemisphere
123.8
2115
Male, age 80, left hemisphere
101.4
2319
Female, age 91, both hemispheres
99.9
Pontine raphe nucleus nTPM: 189.2
2122
Female, age 85, midline
201.5
2853
Male, age 76, midline
176.8
Posteroventral cochlear nucleus nTPM: 97.8
2752
Female, age 85, both hemispheres
161.7
2070
Male, age 76, both hemispheres
129.9
2371
Male, age 61, both hemispheres
86.1
2341
Male, age 80, both hemispheres
61.9
2135
Female, age 91, both hemispheres
49.4
Principal sensory trigeminal nucleus nTPM: 133.1
2158
Male, age 61, both hemispheres
167.3
2008
Male, age 80, left hemisphere
150.9
2324
Male, age 76, both hemispheres
114.8
2367
Female, age 91, left hemisphere
99.5
Reticular pontine nucleus, caudal nTPM: 150.1
2092
Male, age 76, both hemispheres
181.7
2332
Male, age 80, right hemisphere
165.5
2559
Male, age 74, both hemispheres
153.1
2457
Female, age 91, both hemispheres
100.2
Reticular pontine nucleus, oral nTPM: 129.5
2012
Female, age 85, both hemispheres
185.4
2361
Male, age 74, both hemispheres
145.3
2366
Female, age 91, both hemispheres
113.4
2167
Male, age 76, both hemispheres
107.6
1939
Male, age 80, both hemispheres
95.7
Reticulotegmental nucleus nTPM: 159.9
2325
Male, age 76, both hemispheres
200.6
2452
Male, age 74, both hemispheres
183.7
2333
Male, age 80, both hemispheres
139.6
2322
Female, age 91, both hemispheres
115.5
Spinal trigeminal nucleus, oral nTPM: 110.5
2164
Male, age 80, both hemispheres
116.9
1978
Male, age 76, both hemispheres
113.5
2737
Female, age 85, both hemispheres
101.1
Subcoeruleus area nTPM: 152.1
2323
Female, age 91, left hemisphere
194.9
2451
Male, age 74, both hemispheres
189.3
2089
Male, age 76, left hemisphere
161.6
1958
Male, age 80, both hemispheres
127.8
2369
Female, age 85, left hemisphere
86.8
Superior olive nTPM: 156.3
1875
Female, age 85, both hemispheres
201.8
2020
Male, age 76, both hemispheres
168.1
2329
Male, age 80, right hemisphere
143.2
2364
Male, age 74, right hemisphere
135.9
2561
Female, age 91, both hemispheres
132.4
Ventral periolivary nuclei nTPM: 158.6
2130
Female, age 85, both hemispheres
183.5
2165
Male, age 80, both hemispheres
170.5
2023
Male, age 76, both hemispheres
154.6
2794
Female, age 91, left hemisphere
125.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 125.4
1959
Male, age 76, both hemispheres
162.4
2449
Male, age 74, both hemispheres
149.0
2161
Male, age 80, both hemispheres
135.4
2840
Female, age 85, both hemispheres
116.1
2359
Male, age 61, both hemispheres
96.0
2456
Female, age 91, both hemispheres
93.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
291.5
Pig sample
Sample description
nTPM
Pons nTPM: 291.5
Samples: 4
Max nTPM: 458.2
Min nTPM: 230.5
Sample A
Female
458.2
Sample B
Female
234.6
Sample C
Male
242.8
Sample D
Male
230.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
