HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:12.9 nTPM
HPA Brain:28.7 nTPM
GTEx:12.9 nTPM
FANTOM5:26.8 Scaled Tags Per Million
Pig:16.3 nTPM
Mouse:10.4 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008904
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.7
2148 Female, age 91, left hemisphere 38.3
1911 Female, age 85, right hemisphere 33.5
1898 Male, age 80, left hemisphere 32.1
2529 Female, age 94, left hemisphere 31.7
2621 Female, age 67, right hemisphere 20.3
1855 Male, age 76, left hemisphere 16.3
Dentate gyrus
nTPM: 23.5
2528 Male, age 74, both hemispheres 31.9
2246 Female, age 85, both hemispheres 24.2
1927 Female, age 91, both hemispheres 23.6
2530 Female, age 94, left hemisphere 23.3
2010 Male, age 76, both hemispheres 21.4
2531 Female, age 67, both hemispheres 16.8
Entorhinal gyrus
nTPM: 20.2
2117 Female, age 91, right hemisphere 32.8
1938 Female, age 85, left hemisphere 21.4
2686 Male, age 75, right hemisphere 18.4
2764 Male, age 80, right hemisphere 18.2
1787 Male, age 76, left hemisphere 16.3
2613 Female, age 94, left hemisphere 14.2
Hippocampus, CA1
nTPM: 25.3
2527 Male, age 74, both hemispheres 32.1
1873 Female, age 85, both hemispheres 31.1
2082 Female, age 91, right hemisphere 27.5
2045 Male, age 76, both hemispheres 20.7
2749 Male, age 80, left hemisphere 15.0
Hippocampus, CA2
nTPM: 25.3
2249 Male, age 74, both hemispheres 36.2
1940 Female, age 85, left hemisphere 31.6
2113 Female, age 91, right hemisphere 28.3
1963 Male, age 80, left hemisphere 26.1
2437 Female, age 94, left hemisphere 17.6
1892 Male, age 76, both hemispheres 11.9
Hippocampus, CA3
nTPM: 21.3
1891 Female, age 85, both hemispheres 29.5
2620 Female, age 94, left hemisphere 23.9
2436 Male, age 74, both hemispheres 23.4
2861 Female, age 67, both hemispheres 23.4
1867 Male, age 76, both hemispheres 14.9
2137 Male, age 80, left hemisphere 12.7
Parahippocampal cortex
nTPM: 19.1
1990 Female, age 91, right hemisphere 22.9
1933 Female, age 85, both hemispheres 22.7
2692 Male, age 74, both hemispheres 21.5
2250 Female, age 67, right hemisphere 21.4
2622 Female, age 67, right hemisphere 21.1
2245 Female, age 91, both hemispheres 20.3
2018 Male, age 76, both hemispheres 17.9
1850 Male, age 80, both hemispheres 17.7
2693 Female, age 94, both hemispheres 13.4
2532 Female, age 72, left hemisphere 12.0
Perirhinal gyrus
nTPM: 16.0
1794 Male, age 80, right hemisphere 17.2
2521 Female, age 94, right hemisphere 16.6
1841 Female, age 85, right hemisphere 16.5
1847 Female, age 91, left hemisphere 16.1
2848 Male, age 76, right hemisphere 13.6
Subiculum
nTPM: 23.3
2729 Female, age 91, right hemisphere 43.4
2619 Male, age 74, both hemispheres 23.7
1977 Female, age 85, both hemispheres 21.9
1901 Male, age 80, both hemispheres 21.5
2042 Male, age 76, both hemispheres 15.9
2438 Female, age 94, left hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 33.4
Min nTPM: 2.2
Std nTPM: 5.7
Median nTPM: 11.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 33.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 31.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 30.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 30.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 29.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 28.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 25.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 24.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 24.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.8
FF:10153-102I9 76 years, female 35.9
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.3
Pig sample Sample description nTPM
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 17.6
Min nTPM: 14.0
Sample A Female 17.4
Sample B Female 17.6
Sample C Male 14.0
Sample D Male 16.0
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.7
Sample A Female 16.2
Sample B Female 16.0
Sample C Male 16.9
Sample D Male 13.7
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 17.9
Min nTPM: 12.7
Sample A Female 12.7
Sample B Female 17.9
Sample C Male 14.5
Sample D Male 13.0
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 15.7
Sample C Male 17.7
Sample D Male 15.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.5
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.6
Sample A Male 9.7
Sample B Male 9.6
Sample C Female 10.7
Sample D Female 11.9
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.9
Sample A Male 7.9
Sample B Male 9.5
Sample C Female 9.6
Sample D Female 12.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
69257427 Antisense, RP_050331_02_E11, Mouse strain C57BL/6J (56 days, male) 2.2
74988700 Antisense, RP_060315_04_A08, Mouse strain C57BL/6J (56 days, male) 0.6

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