HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:20.6 nTPM
HPA Brain:32.9 nTPM
GTEx:20.6 nTPM
FANTOM5:52.4 Scaled Tags Per Million
Pig:38.1 nTPM
Mouse:34.8 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015718Antibody HPA017281
Glial cells MediumLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
1898 Male, age 80, left hemisphere 33.8
1911 Female, age 85, right hemisphere 33.7
1855 Male, age 76, left hemisphere 33.3
2621 Female, age 67, right hemisphere 27.8
2148 Female, age 91, left hemisphere 27.4
2529 Female, age 94, left hemisphere 25.5
Dentate gyrus
nTPM: 29.7
2010 Male, age 76, both hemispheres 35.2
2528 Male, age 74, both hemispheres 31.6
1927 Female, age 91, both hemispheres 31.1
2246 Female, age 85, both hemispheres 28.7
2531 Female, age 67, both hemispheres 26.0
2530 Female, age 94, left hemisphere 25.7
Entorhinal gyrus
nTPM: 30.1
1938 Female, age 85, left hemisphere 33.6
1787 Male, age 76, left hemisphere 32.3
2117 Female, age 91, right hemisphere 31.8
2613 Female, age 94, left hemisphere 31.8
2764 Male, age 80, right hemisphere 28.6
2686 Male, age 75, right hemisphere 22.4
Hippocampus, CA1
nTPM: 32.0
2749 Male, age 80, left hemisphere 40.2
1873 Female, age 85, both hemispheres 33.2
2527 Male, age 74, both hemispheres 32.3
2045 Male, age 76, both hemispheres 29.0
2082 Female, age 91, right hemisphere 25.2
Hippocampus, CA2
nTPM: 31.4
1892 Male, age 76, both hemispheres 36.4
2249 Male, age 74, both hemispheres 34.9
1963 Male, age 80, left hemisphere 32.3
1940 Female, age 85, left hemisphere 32.0
2437 Female, age 94, left hemisphere 26.5
2113 Female, age 91, right hemisphere 26.1
Hippocampus, CA3
nTPM: 31.2
1891 Female, age 85, both hemispheres 37.4
2137 Male, age 80, left hemisphere 37.3
1867 Male, age 76, both hemispheres 35.7
2436 Male, age 74, both hemispheres 28.7
2620 Female, age 94, left hemisphere 27.7
2861 Female, age 67, both hemispheres 20.3
Parahippocampal cortex
nTPM: 29.7
1850 Male, age 80, both hemispheres 34.1
1990 Female, age 91, right hemisphere 32.1
1933 Female, age 85, both hemispheres 32.0
2693 Female, age 94, both hemispheres 31.9
2018 Male, age 76, both hemispheres 30.6
2250 Female, age 67, right hemisphere 30.0
2692 Male, age 74, both hemispheres 29.4
2532 Female, age 72, left hemisphere 28.8
2245 Female, age 91, both hemispheres 26.8
2622 Female, age 67, right hemisphere 21.2
Perirhinal gyrus
nTPM: 31.7
2521 Female, age 94, right hemisphere 33.7
1841 Female, age 85, right hemisphere 31.3
1847 Female, age 91, left hemisphere 31.2
2848 Male, age 76, right hemisphere 31.2
1794 Male, age 80, right hemisphere 31.1
Subiculum
nTPM: 32.9
1901 Male, age 80, both hemispheres 36.7
1977 Female, age 85, both hemispheres 35.0
2438 Female, age 94, left hemisphere 34.2
2042 Male, age 76, both hemispheres 33.1
2619 Male, age 74, both hemispheres 29.7
2729 Female, age 91, right hemisphere 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 35.2
Min nTPM: 9.4
Std nTPM: 5.0
Median nTPM: 20.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 35.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 33.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 32.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 32.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 32.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 32.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 30.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 30.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 30.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 29.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.4
FF:10169-103B7 60 years, female 54.0
FF:10153-102I9 76 years, female 50.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.1
Pig sample Sample description nTPM
Subiculum
nTPM: 29.5
Samples: 4

Max nTPM: 35.6
Min nTPM: 26.7
Sample A Female 35.6
Sample B Female 27.3
Sample C Male 26.7
Sample D Male 28.5
Dorsal hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 57.9
Min nTPM: 26.9
Sample A Female 57.9
Sample B Female 31.1
Sample C Male 36.7
Sample D Male 26.9
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 32.2
Min nTPM: 27.1
Sample A Female 32.2
Sample B Female 27.1
Sample C Male 27.9
Sample D Male 28.4
Ventral hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 42.8
Min nTPM: 22.0
Sample A Female 42.8
Sample B Female 22.0
Sample C Male 31.2
Sample D Male 38.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 32.7
Min nTPM: 30.4
Sample A Male 30.4
Sample B Male 31.6
Sample C Female 32.7
Sample D Female 30.5
Hippocampal formation
nTPM: 34.8
Samples: 4

Max nTPM: 39.8
Min nTPM: 32.4
Sample A Male 39.8
Sample B Male 34.3
Sample C Female 32.8
Sample D Female 32.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
70609233 Antisense, RP_050414_01_D10, Mouse strain C57BL/6J (56 days, male) 1.0

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