HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:219.1 nTPM
HPA Brain:83.8 nTPM
GTEx:219.1 nTPM
FANTOM5:307.0 Scaled Tags Per Million
Pig:42.5 nTPM
Mouse:295.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031069
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.8
Sample id Sample description nTPM
Hippocampus
nTPM: 74.5
1898 Male, age 80, left hemisphere 93.9
2529 Female, age 94, left hemisphere 85.1
1855 Male, age 76, left hemisphere 70.8
2621 Female, age 67, right hemisphere 68.4
1911 Female, age 85, right hemisphere 67.8
2148 Female, age 91, left hemisphere 60.9
Dentate gyrus
nTPM: 74.6
2530 Female, age 94, left hemisphere 92.8
2246 Female, age 85, both hemispheres 87.3
1927 Female, age 91, both hemispheres 77.2
2010 Male, age 76, both hemispheres 76.1
2531 Female, age 67, both hemispheres 58.1
2528 Male, age 74, both hemispheres 56.0
Entorhinal gyrus
nTPM: 64.7
1938 Female, age 85, left hemisphere 76.5
2764 Male, age 80, right hemisphere 68.9
2117 Female, age 91, right hemisphere 67.3
1787 Male, age 76, left hemisphere 64.3
2613 Female, age 94, left hemisphere 57.1
2686 Male, age 75, right hemisphere 54.4
Hippocampus, CA1
nTPM: 78.7
2749 Male, age 80, left hemisphere 106.4
2527 Male, age 74, both hemispheres 92.2
1873 Female, age 85, both hemispheres 74.1
2045 Male, age 76, both hemispheres 61.5
2082 Female, age 91, right hemisphere 59.3
Hippocampus, CA2
nTPM: 83.8
2249 Male, age 74, both hemispheres 96.4
1892 Male, age 76, both hemispheres 96.0
1963 Male, age 80, left hemisphere 92.1
2437 Female, age 94, left hemisphere 81.8
1940 Female, age 85, left hemisphere 71.3
2113 Female, age 91, right hemisphere 65.5
Hippocampus, CA3
nTPM: 77.7
2436 Male, age 74, both hemispheres 111.9
2137 Male, age 80, left hemisphere 92.1
1867 Male, age 76, both hemispheres 80.2
1891 Female, age 85, both hemispheres 76.9
2620 Female, age 94, left hemisphere 53.7
2861 Female, age 67, both hemispheres 51.3
Parahippocampal cortex
nTPM: 72.6
1850 Male, age 80, both hemispheres 88.4
2245 Female, age 91, both hemispheres 88.2
1990 Female, age 91, right hemisphere 85.3
2250 Female, age 67, right hemisphere 81.9
2532 Female, age 72, left hemisphere 73.1
2018 Male, age 76, both hemispheres 70.8
1933 Female, age 85, both hemispheres 70.3
2692 Male, age 74, both hemispheres 61.6
2693 Female, age 94, both hemispheres 55.1
2622 Female, age 67, right hemisphere 51.0
Perirhinal gyrus
nTPM: 81.2
1847 Female, age 91, left hemisphere 94.8
1841 Female, age 85, right hemisphere 92.3
1794 Male, age 80, right hemisphere 86.9
2521 Female, age 94, right hemisphere 68.5
2848 Male, age 76, right hemisphere 63.5
Subiculum
nTPM: 74.9
2438 Female, age 94, left hemisphere 102.2
1901 Male, age 80, both hemispheres 81.4
1977 Female, age 85, both hemispheres 77.8
2042 Male, age 76, both hemispheres 63.4
2619 Male, age 74, both hemispheres 62.2
2729 Female, age 91, right hemisphere 62.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 219.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 219.1
Samples: 197

Max nTPM: 738.7
Min nTPM: 113.8
Std nTPM: 68.5
Median nTPM: 202.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 738.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 439.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 416.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 381.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 378.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 368.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 359.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 356.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 342.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 339.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 322.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 307.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 307.0
FF:10169-103B7 60 years, female 372.8
FF:10153-102I9 76 years, female 241.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.5
Pig sample Sample description nTPM
Subiculum
nTPM: 35.9
Samples: 4

Max nTPM: 45.2
Min nTPM: 31.3
Sample A Female 45.2
Sample B Female 35.2
Sample C Male 31.8
Sample D Male 31.3
Dorsal hippocampus
nTPM: 42.0
Samples: 4

Max nTPM: 51.5
Min nTPM: 33.4
Sample A Female 51.5
Sample B Female 38.8
Sample C Male 44.4
Sample D Male 33.4
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 56.2
Min nTPM: 32.6
Sample A Female 36.3
Sample B Female 56.2
Sample C Male 44.8
Sample D Male 32.6
Ventral hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 43.4
Min nTPM: 34.4
Sample A Female 43.4
Sample B Female 34.4
Sample C Male 40.0
Sample D Male 35.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 295.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 288.1
Samples: 4

Max nTPM: 303.0
Min nTPM: 255.7
Sample A Male 291.6
Sample B Male 301.9
Sample C Female 303.0
Sample D Female 255.7
Hippocampal formation
nTPM: 295.0
Samples: 4

Max nTPM: 350.9
Min nTPM: 274.8
Sample A Male 350.9
Sample B Male 279.1
Sample C Female 275.2
Sample D Female 274.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
124 Antisense, RP_Baylor_102641, Mouse strain C57BL/6J (56 days, male) 0.9
125 Antisense, RP_Baylor_102641, Mouse strain C57BL/6J (56 days, male) 0.1

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