HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.5 nTPM
HPA Brain:32.1 nTPM
GTEx:31.5 nTPM
FANTOM5:57.9 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:2.4 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056299
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.1
Sample id Sample description nTPM
Hippocampus
nTPM: 29.5
1898 Male, age 80, left hemisphere 34.7
1855 Male, age 76, left hemisphere 34.0
2148 Female, age 91, left hemisphere 29.3
2621 Female, age 67, right hemisphere 28.3
1911 Female, age 85, right hemisphere 25.4
2529 Female, age 94, left hemisphere 25.1
Dentate gyrus
nTPM: 28.3
2010 Male, age 76, both hemispheres 32.2
1927 Female, age 91, both hemispheres 31.7
2530 Female, age 94, left hemisphere 28.3
2531 Female, age 67, both hemispheres 27.9
2528 Male, age 74, both hemispheres 25.0
2246 Female, age 85, both hemispheres 24.6
Entorhinal gyrus
nTPM: 26.4
2764 Male, age 80, right hemisphere 29.5
1787 Male, age 76, left hemisphere 28.1
2613 Female, age 94, left hemisphere 28.0
1938 Female, age 85, left hemisphere 27.5
2117 Female, age 91, right hemisphere 23.3
2686 Male, age 75, right hemisphere 22.1
Hippocampus, CA1
nTPM: 32.1
2749 Male, age 80, left hemisphere 46.1
2045 Male, age 76, both hemispheres 32.1
1873 Female, age 85, both hemispheres 29.2
2527 Male, age 74, both hemispheres 28.3
2082 Female, age 91, right hemisphere 24.7
Hippocampus, CA2
nTPM: 27.2
1963 Male, age 80, left hemisphere 39.0
1892 Male, age 76, both hemispheres 30.5
2113 Female, age 91, right hemisphere 25.7
2249 Male, age 74, both hemispheres 23.8
1940 Female, age 85, left hemisphere 22.2
2437 Female, age 94, left hemisphere 22.0
Hippocampus, CA3
nTPM: 29.7
2137 Male, age 80, left hemisphere 35.6
2620 Female, age 94, left hemisphere 32.2
2861 Female, age 67, both hemispheres 30.7
1867 Male, age 76, both hemispheres 29.1
2436 Male, age 74, both hemispheres 25.6
1891 Female, age 85, both hemispheres 25.2
Parahippocampal cortex
nTPM: 26.1
1850 Male, age 80, both hemispheres 31.6
2018 Male, age 76, both hemispheres 28.1
1933 Female, age 85, both hemispheres 26.7
2250 Female, age 67, right hemisphere 26.1
2245 Female, age 91, both hemispheres 25.7
2693 Female, age 94, both hemispheres 25.1
2622 Female, age 67, right hemisphere 24.8
2692 Male, age 74, both hemispheres 24.8
1990 Female, age 91, right hemisphere 24.2
2532 Female, age 72, left hemisphere 23.4
Perirhinal gyrus
nTPM: 29.6
1794 Male, age 80, right hemisphere 33.2
1847 Female, age 91, left hemisphere 30.2
2521 Female, age 94, right hemisphere 29.2
2848 Male, age 76, right hemisphere 28.1
1841 Female, age 85, right hemisphere 27.4
Subiculum
nTPM: 24.8
2729 Female, age 91, right hemisphere 27.8
2619 Male, age 74, both hemispheres 26.0
1901 Male, age 80, both hemispheres 25.6
1977 Female, age 85, both hemispheres 24.8
2042 Male, age 76, both hemispheres 22.2
2438 Female, age 94, left hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.5
Samples: 197

Max nTPM: 58.2
Min nTPM: 14.7
Std nTPM: 7.1
Median nTPM: 30.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 58.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 51.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 49.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 46.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 45.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 45.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 45.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 43.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 42.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 42.6
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 42.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.9
FF:10169-103B7 60 years, female 69.5
FF:10153-102I9 76 years, female 46.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 14.3
Sample A Female 18.6
Sample B Female 16.4
Sample C Male 14.6
Sample D Male 14.3
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 18.9
Min nTPM: 13.5
Sample A Female 18.9
Sample B Female 17.1
Sample C Male 16.0
Sample D Male 13.5
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.8
Sample A Female 16.0
Sample B Female 13.7
Sample C Male 15.7
Sample D Male 12.8
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.7
Sample A Female 18.9
Sample B Female 13.7
Sample C Male 19.9
Sample D Male 17.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 6.1
Min nTPM: 0.1
Sample A Male 6.1
Sample B Male 2.4
Sample C Female 1.0
Sample D Female 0.1
Hippocampal formation
nTPM: 1.8
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.1
Sample A Male 2.1
Sample B Male 1.1
Sample C Female 1.6
Sample D Female 2.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
68797709 Antisense, RP_050215_01_A03, Mouse strain C57BL/6J (56 days, male) 2.0

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