HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:27.9 nTPM
HPA Brain:43.6 nTPM
GTEx:27.9 nTPM
FANTOM5:31.7 Scaled Tags Per Million
Pig:41.5 nTPM
Mouse:25.5 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037523
Glial cells Not detected
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.6
Sample id Sample description nTPM
Hippocampus
nTPM: 36.2
1898 Male, age 80, left hemisphere 41.1
2148 Female, age 91, left hemisphere 40.9
2621 Female, age 67, right hemisphere 40.8
1855 Male, age 76, left hemisphere 35.8
1911 Female, age 85, right hemisphere 31.9
2529 Female, age 94, left hemisphere 26.8
Dentate gyrus
nTPM: 37.8
1927 Female, age 91, both hemispheres 42.6
2531 Female, age 67, both hemispheres 41.3
2530 Female, age 94, left hemisphere 37.8
2010 Male, age 76, both hemispheres 37.0
2528 Male, age 74, both hemispheres 36.4
2246 Female, age 85, both hemispheres 31.9
Entorhinal gyrus
nTPM: 35.9
2613 Female, age 94, left hemisphere 47.2
2764 Male, age 80, right hemisphere 38.0
1787 Male, age 76, left hemisphere 36.5
1938 Female, age 85, left hemisphere 32.2
2686 Male, age 75, right hemisphere 31.7
2117 Female, age 91, right hemisphere 30.0
Hippocampus, CA1
nTPM: 42.9
2749 Male, age 80, left hemisphere 70.9
1873 Female, age 85, both hemispheres 37.3
2045 Male, age 76, both hemispheres 37.3
2527 Male, age 74, both hemispheres 36.3
2082 Female, age 91, right hemisphere 32.8
Hippocampus, CA2
nTPM: 36.9
1963 Male, age 80, left hemisphere 48.8
1892 Male, age 76, both hemispheres 43.3
2249 Male, age 74, both hemispheres 34.2
2437 Female, age 94, left hemisphere 33.9
2113 Female, age 91, right hemisphere 31.2
1940 Female, age 85, left hemisphere 30.3
Hippocampus, CA3
nTPM: 43.6
2137 Male, age 80, left hemisphere 54.5
2620 Female, age 94, left hemisphere 52.4
2861 Female, age 67, both hemispheres 44.2
2436 Male, age 74, both hemispheres 41.8
1867 Male, age 76, both hemispheres 37.3
1891 Female, age 85, both hemispheres 31.5
Parahippocampal cortex
nTPM: 32.6
2622 Female, age 67, right hemisphere 35.4
1990 Female, age 91, right hemisphere 34.6
2245 Female, age 91, both hemispheres 34.0
2693 Female, age 94, both hemispheres 32.9
1933 Female, age 85, both hemispheres 32.7
2532 Female, age 72, left hemisphere 32.7
1850 Male, age 80, both hemispheres 32.4
2250 Female, age 67, right hemisphere 31.0
2018 Male, age 76, both hemispheres 30.1
2692 Male, age 74, both hemispheres 29.8
Perirhinal gyrus
nTPM: 35.2
1847 Female, age 91, left hemisphere 37.3
1794 Male, age 80, right hemisphere 36.8
2521 Female, age 94, right hemisphere 34.7
1841 Female, age 85, right hemisphere 33.7
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 31.3
1901 Male, age 80, both hemispheres 38.3
1977 Female, age 85, both hemispheres 34.1
2729 Female, age 91, right hemisphere 32.2
2042 Male, age 76, both hemispheres 31.2
2619 Male, age 74, both hemispheres 27.7
2438 Female, age 94, left hemisphere 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 59.5
Min nTPM: 11.7
Std nTPM: 9.4
Median nTPM: 26.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 59.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 56.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 52.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 50.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 47.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 47.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 47.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 47.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 46.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 46.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.7
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.5
Pig sample Sample description nTPM
Subiculum
nTPM: 30.8
Samples: 4

Max nTPM: 36.1
Min nTPM: 24.3
Sample A Female 36.1
Sample B Female 28.9
Sample C Male 33.7
Sample D Male 24.3
Dorsal hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 50.8
Min nTPM: 29.8
Sample A Female 50.8
Sample B Female 45.7
Sample C Male 39.8
Sample D Male 29.8
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 33.6
Min nTPM: 28.7
Sample A Female 28.7
Sample B Female 33.6
Sample C Male 32.0
Sample D Male 29.1
Ventral hippocampus
nTPM: 40.2
Samples: 4

Max nTPM: 53.1
Min nTPM: 28.0
Sample A Female 36.1
Sample B Female 28.0
Sample C Male 43.4
Sample D Male 53.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 26.6
Min nTPM: 23.2
Sample A Male 24.1
Sample B Male 26.4
Sample C Female 23.2
Sample D Female 26.6
Hippocampal formation
nTPM: 25.5
Samples: 4

Max nTPM: 26.5
Min nTPM: 23.3
Sample A Male 23.3
Sample B Male 26.3
Sample C Female 25.9
Sample D Female 26.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
75774663 Antisense, RP_060601_01_B08, Mouse strain C57BL/6J (56 days, male) 5.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org