HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.2 nTPM
HPA Brain:29.5 nTPM
GTEx:12.2 nTPM
FANTOM5:64.2 Scaled Tags Per Million
Pig:70.7 nTPM
Mouse:33.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014797
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.5
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
1898 Male, age 80, left hemisphere 31.3
1855 Male, age 76, left hemisphere 23.7
1911 Female, age 85, right hemisphere 20.8
2529 Female, age 94, left hemisphere 19.2
2621 Female, age 67, right hemisphere 18.4
2148 Female, age 91, left hemisphere 16.0
Dentate gyrus
nTPM: 22.0
1927 Female, age 91, both hemispheres 28.1
2010 Male, age 76, both hemispheres 26.6
2528 Male, age 74, both hemispheres 22.6
2246 Female, age 85, both hemispheres 20.3
2530 Female, age 94, left hemisphere 19.2
2531 Female, age 67, both hemispheres 14.9
Entorhinal gyrus
nTPM: 20.5
1938 Female, age 85, left hemisphere 26.7
1787 Male, age 76, left hemisphere 22.0
2764 Male, age 80, right hemisphere 20.6
2613 Female, age 94, left hemisphere 20.4
2117 Female, age 91, right hemisphere 19.0
2686 Male, age 75, right hemisphere 14.2
Hippocampus, CA1
nTPM: 24.8
2749 Male, age 80, left hemisphere 34.6
1873 Female, age 85, both hemispheres 25.2
2045 Male, age 76, both hemispheres 23.1
2527 Male, age 74, both hemispheres 22.1
2082 Female, age 91, right hemisphere 18.8
Hippocampus, CA2
nTPM: 22.4
1892 Male, age 76, both hemispheres 29.8
1963 Male, age 80, left hemisphere 23.8
2249 Male, age 74, both hemispheres 23.1
1940 Female, age 85, left hemisphere 21.0
2113 Female, age 91, right hemisphere 19.3
2437 Female, age 94, left hemisphere 17.6
Hippocampus, CA3
nTPM: 23.3
2137 Male, age 80, left hemisphere 33.5
1867 Male, age 76, both hemispheres 28.2
2436 Male, age 74, both hemispheres 25.6
1891 Female, age 85, both hemispheres 22.8
2620 Female, age 94, left hemisphere 17.0
2861 Female, age 67, both hemispheres 13.0
Parahippocampal cortex
nTPM: 23.0
1850 Male, age 80, both hemispheres 31.5
2250 Female, age 67, right hemisphere 26.9
1990 Female, age 91, right hemisphere 26.8
2693 Female, age 94, both hemispheres 25.3
1933 Female, age 85, both hemispheres 24.8
2018 Male, age 76, both hemispheres 23.0
2245 Female, age 91, both hemispheres 21.5
2532 Female, age 72, left hemisphere 19.9
2692 Male, age 74, both hemispheres 16.7
2622 Female, age 67, right hemisphere 13.3
Perirhinal gyrus
nTPM: 29.5
1847 Female, age 91, left hemisphere 33.6
1841 Female, age 85, right hemisphere 31.4
2521 Female, age 94, right hemisphere 29.6
1794 Male, age 80, right hemisphere 29.3
2848 Male, age 76, right hemisphere 23.8
Subiculum
nTPM: 21.1
1901 Male, age 80, both hemispheres 27.0
1977 Female, age 85, both hemispheres 25.0
2438 Female, age 94, left hemisphere 20.6
2042 Male, age 76, both hemispheres 19.6
2729 Female, age 91, right hemisphere 17.9
2619 Male, age 74, both hemispheres 16.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 35.2
Min nTPM: 5.6
Std nTPM: 4.0
Median nTPM: 11.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 22.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 22.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 20.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 20.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 18.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.2
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 50.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.7
Pig sample Sample description nTPM
Subiculum
nTPM: 62.6
Samples: 4

Max nTPM: 74.9
Min nTPM: 54.6
Sample A Female 74.9
Sample B Female 54.6
Sample C Male 58.5
Sample D Male 62.2
Dorsal hippocampus
nTPM: 70.7
Samples: 4

Max nTPM: 81.8
Min nTPM: 52.0
Sample A Female 81.8
Sample B Female 76.0
Sample C Male 72.9
Sample D Male 52.0
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 71.6
Min nTPM: 48.3
Sample A Female 68.1
Sample B Female 71.6
Sample C Male 62.5
Sample D Male 48.3
Ventral hippocampus
nTPM: 59.9
Samples: 4

Max nTPM: 74.6
Min nTPM: 49.2
Sample A Female 74.6
Sample B Female 49.2
Sample C Male 51.0
Sample D Male 64.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 35.7
Min nTPM: 29.7
Sample A Male 29.7
Sample B Male 32.0
Sample C Female 33.3
Sample D Female 35.7
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 37.8
Min nTPM: 28.7
Sample A Male 37.8
Sample B Male 32.8
Sample C Female 32.6
Sample D Female 28.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
76003326 Antisense, RP_060608_02_B05, Mouse strain C57BL/6J (56 days, male) 0.1

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