HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:16.1 nTPM
HPA Brain:28.9 nTPM
GTEx:16.1 nTPM
FANTOM5:50.3 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:38.5 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006139Antibody HPA006140Antibody CAB017368
Glial cells Not detectedMediumHigh
Neuronal cells MediumHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.3
1898 Male, age 80, left hemisphere 33.4
2529 Female, age 94, left hemisphere 31.1
2621 Female, age 67, right hemisphere 25.7
1911 Female, age 85, right hemisphere 25.4
2148 Female, age 91, left hemisphere 24.3
1855 Male, age 76, left hemisphere 23.8
Dentate gyrus
nTPM: 28.9
2010 Male, age 76, both hemispheres 41.5
2530 Female, age 94, left hemisphere 35.7
2528 Male, age 74, both hemispheres 27.6
2246 Female, age 85, both hemispheres 24.2
1927 Female, age 91, both hemispheres 22.4
2531 Female, age 67, both hemispheres 22.1
Entorhinal gyrus
nTPM: 21.8
2117 Female, age 91, right hemisphere 31.3
1787 Male, age 76, left hemisphere 24.9
1938 Female, age 85, left hemisphere 24.4
2764 Male, age 80, right hemisphere 20.2
2686 Male, age 75, right hemisphere 16.2
2613 Female, age 94, left hemisphere 14.1
Hippocampus, CA1
nTPM: 25.9
1873 Female, age 85, both hemispheres 29.3
2045 Male, age 76, both hemispheres 26.6
2082 Female, age 91, right hemisphere 25.8
2527 Male, age 74, both hemispheres 24.5
2749 Male, age 80, left hemisphere 23.3
Hippocampus, CA2
nTPM: 27.2
2249 Male, age 74, both hemispheres 35.9
1963 Male, age 80, left hemisphere 28.0
1940 Female, age 85, left hemisphere 27.9
2113 Female, age 91, right hemisphere 24.8
2437 Female, age 94, left hemisphere 23.7
1892 Male, age 76, both hemispheres 23.3
Hippocampus, CA3
nTPM: 24.5
1867 Male, age 76, both hemispheres 34.1
2436 Male, age 74, both hemispheres 30.8
1891 Female, age 85, both hemispheres 25.1
2620 Female, age 94, left hemisphere 19.7
2861 Female, age 67, both hemispheres 18.7
2137 Male, age 80, left hemisphere 18.5
Parahippocampal cortex
nTPM: 22.0
2018 Male, age 76, both hemispheres 34.3
2250 Female, age 67, right hemisphere 24.7
1990 Female, age 91, right hemisphere 23.9
1933 Female, age 85, both hemispheres 23.4
2245 Female, age 91, both hemispheres 23.3
2532 Female, age 72, left hemisphere 22.4
1850 Male, age 80, both hemispheres 20.2
2692 Male, age 74, both hemispheres 18.9
2693 Female, age 94, both hemispheres 14.7
2622 Female, age 67, right hemisphere 14.0
Perirhinal gyrus
nTPM: 20.1
1841 Female, age 85, right hemisphere 21.6
1847 Female, age 91, left hemisphere 21.4
2521 Female, age 94, right hemisphere 19.6
1794 Male, age 80, right hemisphere 18.8
2848 Male, age 76, right hemisphere 18.8
Subiculum
nTPM: 27.2
2042 Male, age 76, both hemispheres 37.7
2729 Female, age 91, right hemisphere 28.3
2438 Female, age 94, left hemisphere 26.1
1901 Male, age 80, both hemispheres 25.2
1977 Female, age 85, both hemispheres 24.6
2619 Male, age 74, both hemispheres 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.1
Samples: 197

Max nTPM: 77.7
Min nTPM: 7.2
Std nTPM: 8.1
Median nTPM: 14.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 77.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 47.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 43.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 40.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 37.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 36.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 36.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 34.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 33.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 31.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 30.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.3
FF:10153-102I9 76 years, female 55.0
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.4
Pig sample Sample description nTPM
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 27.9
Min nTPM: 21.3
Sample A Female 27.9
Sample B Female 22.5
Sample C Male 21.3
Sample D Male 23.2
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 31.6
Min nTPM: 20.0
Sample A Female 31.6
Sample B Female 24.3
Sample C Male 25.7
Sample D Male 20.0
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 25.0
Min nTPM: 18.3
Sample A Female 25.0
Sample B Female 23.1
Sample C Male 22.6
Sample D Male 18.3
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 27.1
Min nTPM: 17.6
Sample A Female 22.8
Sample B Female 17.6
Sample C Male 27.1
Sample D Male 25.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 36.3
Min nTPM: 28.4
Sample A Male 28.4
Sample B Male 29.0
Sample C Female 35.5
Sample D Female 36.3
Hippocampal formation
nTPM: 38.5
Samples: 4

Max nTPM: 48.1
Min nTPM: 29.9
Sample A Male 29.9
Sample B Male 33.3
Sample C Female 42.6
Sample D Female 48.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69540272 Antisense, RP_050426_01_D10, Mouse strain C57BL/6J (56 days, male) 1.1

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