HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:55.0 nTPM
HPA Brain:34.6 nTPM
GTEx:55.0 nTPM
FANTOM5:97.1 Scaled Tags Per Million
Pig:31.3 nTPM
Mouse:101.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023230Antibody CAB006260
Glial cells MediumMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.6
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
1898 Male, age 80, left hemisphere 43.1
1855 Male, age 76, left hemisphere 34.0
1911 Female, age 85, right hemisphere 29.2
2529 Female, age 94, left hemisphere 25.0
2621 Female, age 67, right hemisphere 23.6
2148 Female, age 91, left hemisphere 21.7
Dentate gyrus
nTPM: 29.4
2010 Male, age 76, both hemispheres 39.4
1927 Female, age 91, both hemispheres 36.3
2530 Female, age 94, left hemisphere 29.1
2528 Male, age 74, both hemispheres 27.7
2246 Female, age 85, both hemispheres 25.7
2531 Female, age 67, both hemispheres 18.3
Entorhinal gyrus
nTPM: 25.5
1938 Female, age 85, left hemisphere 32.0
2117 Female, age 91, right hemisphere 28.9
2764 Male, age 80, right hemisphere 25.2
1787 Male, age 76, left hemisphere 24.3
2613 Female, age 94, left hemisphere 21.4
2686 Male, age 75, right hemisphere 21.3
Hippocampus, CA1
nTPM: 34.6
2749 Male, age 80, left hemisphere 48.7
1873 Female, age 85, both hemispheres 41.0
2045 Male, age 76, both hemispheres 32.2
2527 Male, age 74, both hemispheres 27.1
2082 Female, age 91, right hemisphere 24.0
Hippocampus, CA2
nTPM: 32.4
1892 Male, age 76, both hemispheres 44.8
1963 Male, age 80, left hemisphere 41.0
2249 Male, age 74, both hemispheres 32.4
1940 Female, age 85, left hemisphere 26.9
2437 Female, age 94, left hemisphere 26.1
2113 Female, age 91, right hemisphere 23.1
Hippocampus, CA3
nTPM: 28.5
1867 Male, age 76, both hemispheres 39.3
1891 Female, age 85, both hemispheres 34.1
2137 Male, age 80, left hemisphere 33.6
2436 Male, age 74, both hemispheres 26.9
2620 Female, age 94, left hemisphere 20.1
2861 Female, age 67, both hemispheres 16.9
Parahippocampal cortex
nTPM: 26.7
1850 Male, age 80, both hemispheres 36.2
1933 Female, age 85, both hemispheres 32.2
2018 Male, age 76, both hemispheres 30.8
2250 Female, age 67, right hemisphere 29.6
1990 Female, age 91, right hemisphere 29.5
2693 Female, age 94, both hemispheres 26.7
2692 Male, age 74, both hemispheres 23.7
2245 Female, age 91, both hemispheres 22.1
2532 Female, age 72, left hemisphere 20.1
2622 Female, age 67, right hemisphere 15.7
Perirhinal gyrus
nTPM: 31.0
1841 Female, age 85, right hemisphere 35.8
1847 Female, age 91, left hemisphere 34.8
2848 Male, age 76, right hemisphere 29.3
1794 Male, age 80, right hemisphere 28.4
2521 Female, age 94, right hemisphere 26.8
Subiculum
nTPM: 28.5
1901 Male, age 80, both hemispheres 34.2
1977 Female, age 85, both hemispheres 33.0
2042 Male, age 76, both hemispheres 32.6
2729 Female, age 91, right hemisphere 24.0
2619 Male, age 74, both hemispheres 23.9
2438 Female, age 94, left hemisphere 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.0
Samples: 197

Max nTPM: 122.5
Min nTPM: 28.4
Std nTPM: 12.2
Median nTPM: 52.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 122.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 116.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 94.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 94.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 93.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 84.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 75.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 74.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 74.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 73.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 73.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.1
FF:10169-103B7 60 years, female 132.9
FF:10153-102I9 76 years, female 61.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.3
Pig sample Sample description nTPM
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 36.9
Min nTPM: 23.6
Sample A Female 36.9
Sample B Female 26.6
Sample C Male 23.6
Sample D Male 26.4
Dorsal hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 41.1
Min nTPM: 23.6
Sample A Female 41.1
Sample B Female 29.9
Sample C Male 30.6
Sample D Male 23.6
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 34.8
Min nTPM: 22.6
Sample A Female 28.7
Sample B Female 34.8
Sample C Male 26.7
Sample D Male 22.6
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 33.8
Min nTPM: 22.4
Sample A Female 33.8
Sample B Female 22.4
Sample C Male 26.3
Sample D Male 27.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.8
Samples: 4

Max nTPM: 97.8
Min nTPM: 80.7
Sample A Male 80.7
Sample B Male 94.5
Sample C Female 97.8
Sample D Female 86.3
Hippocampal formation
nTPM: 101.3
Samples: 4

Max nTPM: 115.1
Min nTPM: 95.8
Sample A Male 115.1
Sample B Male 96.0
Sample C Female 95.8
Sample D Female 98.3

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