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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
503.4
nTPM
FANTOM5:
373.3
Scaled Tags Per Million
Pig:
127.5
nTPM
Allen mouse:
2.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
503.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 494.0
2188
Female, age 91, both hemispheres
570.9
2301
Female, age 85, both hemispheres
529.6
2090
Male, age 80, both hemispheres
513.4
1984
Male, age 76, both hemispheres
362.0
Dorsal cochlear nucleus nTPM: 450.2
2802
Male, age 74, right hemisphere
514.6
2187
Female, age 91, both hemispheres
506.4
2378
Male, age 80, both hemispheres
471.3
2370
Male, age 61, both hemispheres
448.5
2058
Male, age 76, both hemispheres
310.4
Dorsal tegmental nucleus nTPM: 452.6
2326
Male, age 74, both hemispheres
500.1
2083
Male, age 80, both hemispheres
470.0
2358
Male, age 61, both hemispheres
433.7
1936
Male, age 76, left hemisphere
406.6
Dorsolateral tegmental area nTPM: 423.6
2337
Male, age 61, both hemispheres
511.3
2654
Male, age 80, both hemispheres
495.8
2751
Female, age 85, both hemispheres
419.0
2360
Male, age 74, both hemispheres
385.3
2141
Male, age 76, both hemispheres
306.5
Kolliker-Fuse nucleus nTPM: 503.4
2315
Male, age 76, right hemisphere
542.4
2793
Female, age 91, left hemisphere
521.2
2163
Male, age 80, both hemispheres
446.5
Lateral lemniscal nuclei nTPM: 353.4
2320
Female, age 91, left hemisphere
380.4
2036
Male, age 80, both hemispheres
364.9
2169
Male, age 76, both hemispheres
355.4
2746
Female, age 85, left hemisphere
343.4
2453
Male, age 74, right hemisphere
322.8
Lateral parabrachial nucleus nTPM: 477.6
2792
Male, age 76, both hemispheres
613.9
2013
Male, age 80, both hemispheres
528.3
2139
Female, age 85, right hemisphere
409.3
2790
Male, age 61, both hemispheres
359.0
Lateral vestibular nucleus nTPM: 421.5
2311
Male, age 80, both hemispheres
496.5
2184
Male, age 76, both hemispheres
346.5
Locus coeruleus nTPM: 361.6
2720
Male, age 74, both hemispheres
493.0
2162
Male, age 80, both hemispheres
379.1
2123
Female, age 91, both hemispheres
374.1
2317
Female, age 72, unknown
351.5
2788
Male, age 74, unknown
320.7
2014
Male, age 55, unknown
318.7
1980
Male, age 76, both hemispheres
293.8
Medial parabrachial nucleus nTPM: 431.9
2170
Female, age 91, both hemispheres
525.6
2854
Male, age 80, both hemispheres
505.8
2786
Male, age 76, both hemispheres
380.3
2463
Female, age 85, right hemisphere
374.0
2156
Male, age 61, both hemispheres
373.7
Medial periolivary nuclei nTPM: 378.0
2458
Female, age 91, both hemispheres
432.3
2081
Male, age 80, both hemispheres
414.1
2063
Male, age 76, both hemispheres
380.1
2791
Male, age 74, right hemisphere
374.0
2171
Female, age 85, both hemispheres
289.8
Motor facial nucleus nTPM: 381.9
2697
Female, age 85, both hemispheres
455.3
2795
Female, age 91, both hemispheres
417.6
2365
Male, age 74, right hemisphere
411.6
2126
Male, age 61, both hemispheres
394.2
2327
Male, age 80, both hemispheres
306.7
2062
Male, age 76, both hemispheres
306.2
Motor trigeminal nucleus nTPM: 388.0
2321
Female, age 91, both hemispheres
441.6
2560
Male, age 74, both hemispheres
399.5
2335
Male, age 61, both hemispheres
381.9
2309
Male, age 76, both hemispheres
368.1
2079
Male, age 80, both hemispheres
348.8
Nuclei of the trapezoid body nTPM: 357.7
1983
Male, age 76, both hemispheres
438.9
2166
Male, age 80, both hemispheres
397.9
2159
Male, age 61, both hemispheres
346.9
2368
Female, age 91, both hemispheres
342.0
2735
Female, age 85, both hemispheres
262.9
Nucleus raphe magnus nTPM: 364.1
2051
Male, age 76, both hemispheres
460.3
2459
Female, age 91, both hemispheres
400.8
2455
Male, age 74, both hemispheres
376.8
2328
Male, age 80, both hemispheres
359.2
2160
Male, age 61, both hemispheres
312.9
2172
Female, age 85, both hemispheres
274.3
Paramedian reticular nucleus nTPM: 429.1
2052
Male, age 76, both hemispheres
535.6
2313
Male, age 61, both hemispheres
441.5
2050
Female, age 85, both hemispheres
384.3
2057
Male, age 80, both hemispheres
354.8
Pedunculopontine tegmental nucleus nTPM: 436.6
2338
Male, age 61, both hemispheres
493.3
2334
Male, age 80, both hemispheres
475.9
1921
Female, age 85, both hemispheres
340.5
Pontine nuclei nTPM: 398.5
2319
Female, age 91, both hemispheres
493.0
2454
Male, age 74, left hemisphere
450.3
1863
Male, age 55, unknown
403.5
1968
Male, age 76, left hemisphere
391.5
2109
Female, age 72, unknown
383.6
2115
Male, age 80, left hemisphere
380.3
2787
Female, age 85, both hemispheres
369.7
2727
Male, age 61, right hemisphere
316.1
Pontine raphe nucleus nTPM: 349.6
2853
Male, age 76, midline
357.5
2122
Female, age 85, midline
341.7
Posteroventral cochlear nucleus nTPM: 481.1
2341
Male, age 80, both hemispheres
589.5
2135
Female, age 91, both hemispheres
570.6
2371
Male, age 61, both hemispheres
504.3
2070
Male, age 76, both hemispheres
374.8
2752
Female, age 85, both hemispheres
366.5
Principal sensory trigeminal nucleus nTPM: 357.6
2367
Female, age 91, left hemisphere
455.9
2324
Male, age 76, both hemispheres
345.7
2158
Male, age 61, both hemispheres
325.1
2008
Male, age 80, left hemisphere
303.9
Reticular pontine nucleus, caudal nTPM: 394.9
2457
Female, age 91, both hemispheres
452.6
2559
Male, age 74, both hemispheres
435.5
2092
Male, age 76, both hemispheres
407.8
2332
Male, age 80, right hemisphere
283.9
Reticular pontine nucleus, oral nTPM: 427.6
2366
Female, age 91, both hemispheres
532.0
1939
Male, age 80, both hemispheres
444.6
2167
Male, age 76, both hemispheres
419.1
2361
Male, age 74, both hemispheres
376.0
2012
Female, age 85, both hemispheres
366.4
Reticulotegmental nucleus nTPM: 376.9
2322
Female, age 91, both hemispheres
423.0
2452
Male, age 74, both hemispheres
406.4
2333
Male, age 80, both hemispheres
367.9
2325
Male, age 76, both hemispheres
310.4
Spinal trigeminal nucleus, oral nTPM: 359.0
2164
Male, age 80, both hemispheres
387.1
1978
Male, age 76, both hemispheres
369.2
2737
Female, age 85, both hemispheres
320.6
Subcoeruleus area nTPM: 399.9
2369
Female, age 85, left hemisphere
471.4
2451
Male, age 74, both hemispheres
451.0
1958
Male, age 80, both hemispheres
412.1
2323
Female, age 91, left hemisphere
348.9
2089
Male, age 76, left hemisphere
316.0
Superior olive nTPM: 379.0
2020
Male, age 76, both hemispheres
449.0
2561
Female, age 91, both hemispheres
411.1
2364
Male, age 74, right hemisphere
363.7
2329
Male, age 80, right hemisphere
345.7
1875
Female, age 85, both hemispheres
325.4
Ventral periolivary nuclei nTPM: 388.3
2023
Male, age 76, both hemispheres
480.2
2794
Female, age 91, left hemisphere
391.3
2165
Male, age 80, both hemispheres
355.6
2130
Female, age 85, both hemispheres
326.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 399.5
2840
Female, age 85, both hemispheres
456.5
2161
Male, age 80, both hemispheres
425.5
2359
Male, age 61, both hemispheres
404.6
1959
Male, age 76, both hemispheres
398.2
2456
Female, age 91, both hemispheres
384.8
2449
Male, age 74, both hemispheres
327.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
127.5
Pig sample
Sample description
nTPM
Pons nTPM: 127.5
Samples: 4
Max nTPM: 160.8
Min nTPM: 95.7
Sample A
Female
138.9
Sample B
Female
95.7
Sample C
Male
160.8
Sample D
Male
114.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
