HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		120.146
Protein expressioni No data
RNA expressioni
Consensus:57.8 nTPM
HPA Brain:283.3 nTPM
GTEx:57.8 nTPM
FANTOM5:200.3 Scaled Tags Per Million
Pig:377.4 nTPM
Mouse:148.2 nTPM
Allen mouse:18.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079005
Hippocampal formation mean intensity 120.146
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 111.789
Molecular layer of the dentate gyrus 101.736
Granular dentate gyrus 71.446
CA1 - oriens layer 95.982
CA1 - pyramidal layer 57.399
CA1 - radiatum layer 101.258
CA2 - oriens layer 106.581
CA2 - pyramidal layer 72.633
CA2 - radiatum layer 109.234
CA3 - oriens layer 117.415
CA3 - pyramidal layer 70.305
CA3 - radiatum layer 114.155
Stratum lucidum 100.718
Lacunosum moleculare 75.247
Subiculum 99.660

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 283.3
Sample id Sample description nTPM
Hippocampus
nTPM: 142.1
1898 Male, age 80, left hemisphere 246.3
1855 Male, age 76, left hemisphere 175.4
2148 Female, age 91, left hemisphere 165.9
2621 Female, age 67, right hemisphere 131.7
2529 Female, age 94, left hemisphere 67.1
1911 Female, age 85, right hemisphere 66.1
Dentate gyrus
nTPM: 172.1
2530 Female, age 94, left hemisphere 187.9
1927 Female, age 91, both hemispheres 183.0
2246 Female, age 85, both hemispheres 175.8
2010 Male, age 76, both hemispheres 168.0
2528 Male, age 74, both hemispheres 162.3
2531 Female, age 67, both hemispheres 155.4
Entorhinal gyrus
nTPM: 191.8
2764 Male, age 80, right hemisphere 279.3
2613 Female, age 94, left hemisphere 239.0
1938 Female, age 85, left hemisphere 215.5
1787 Male, age 76, left hemisphere 164.0
2686 Male, age 75, right hemisphere 156.5
2117 Female, age 91, right hemisphere 96.8
Hippocampus, CA1
nTPM: 155.2
1873 Female, age 85, both hemispheres 189.4
2749 Male, age 80, left hemisphere 176.7
2082 Female, age 91, right hemisphere 162.6
2045 Male, age 76, both hemispheres 137.6
2527 Male, age 74, both hemispheres 109.7
Hippocampus, CA2
nTPM: 156.6
1963 Male, age 80, left hemisphere 237.7
1892 Male, age 76, both hemispheres 189.3
1940 Female, age 85, left hemisphere 171.6
2113 Female, age 91, right hemisphere 131.3
2437 Female, age 94, left hemisphere 130.6
2249 Male, age 74, both hemispheres 79.1
Hippocampus, CA3
nTPM: 128.7
2620 Female, age 94, left hemisphere 194.0
2861 Female, age 67, both hemispheres 174.8
1867 Male, age 76, both hemispheres 118.5
2137 Male, age 80, left hemisphere 96.5
2436 Male, age 74, both hemispheres 94.7
1891 Female, age 85, both hemispheres 93.4
Parahippocampal cortex
nTPM: 193.2
1850 Male, age 80, both hemispheres 282.5
2693 Female, age 94, both hemispheres 248.9
1933 Female, age 85, both hemispheres 227.5
2245 Female, age 91, both hemispheres 203.8
2532 Female, age 72, left hemisphere 196.7
1990 Female, age 91, right hemisphere 194.4
2622 Female, age 67, right hemisphere 170.3
2250 Female, age 67, right hemisphere 150.6
2018 Male, age 76, both hemispheres 135.3
2692 Male, age 74, both hemispheres 122.1
Perirhinal gyrus
nTPM: 283.3
1847 Female, age 91, left hemisphere 363.0
1794 Male, age 80, right hemisphere 314.0
2521 Female, age 94, right hemisphere 283.6
1841 Female, age 85, right hemisphere 241.7
2848 Male, age 76, right hemisphere 214.0
Subiculum
nTPM: 104.9
1977 Female, age 85, both hemispheres 187.1
2619 Male, age 74, both hemispheres 119.4
2729 Female, age 91, right hemisphere 114.0
1901 Male, age 80, both hemispheres 82.2
2438 Female, age 94, left hemisphere 67.7
2042 Male, age 76, both hemispheres 58.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.8
Samples: 197

Max nTPM: 296.0
Min nTPM: 0.7
Std nTPM: 53.2
Median nTPM: 41.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 296.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 245.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 216.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 207.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 206.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 200.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 195.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 174.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 172.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 169.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 168.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 200.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.3
FF:10169-103B7 60 years, female 253.4
FF:10153-102I9 76 years, female 147.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 377.4
Pig sample Sample description nTPM
Subiculum
nTPM: 272.6
Samples: 4

Max nTPM: 337.7
Min nTPM: 232.3
Sample A Female 337.7
Sample B Female 243.0
Sample C Male 277.5
Sample D Male 232.3
Dorsal hippocampus
nTPM: 266.8
Samples: 4

Max nTPM: 363.0
Min nTPM: 123.3
Sample A Female 352.3
Sample B Female 363.0
Sample C Male 123.3
Sample D Male 228.6
Entorhinal cortex
nTPM: 236.2
Samples: 4

Max nTPM: 273.5
Min nTPM: 201.2
Sample A Female 273.5
Sample B Female 201.2
Sample C Male 262.0
Sample D Male 208.1
Ventral hippocampus
nTPM: 377.4
Samples: 4

Max nTPM: 525.3
Min nTPM: 225.7
Sample A Female 515.4
Sample B Female 225.7
Sample C Male 525.3
Sample D Male 243.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 135.5
Samples: 4

Max nTPM: 180.3
Min nTPM: 107.6
Sample A Male 107.6
Sample B Male 120.3
Sample C Female 133.6
Sample D Female 180.3
Hippocampal formation
nTPM: 148.2
Samples: 4

Max nTPM: 159.3
Min nTPM: 141.4
Sample A Male 141.4
Sample B Male 159.3
Sample C Female 142.3
Sample D Female 149.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.3
71020896 Antisense, RP_050512_03_H05, Mouse strain C57BL/6J (56 days, male) 18.7
73929870 Antisense, RP_051214_03_H04, Mouse strain C57BL/6J (56 days, male) 18.0

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