HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:9.4 nTPM
HPA Brain:21.9 nTPM
GTEx:9.4 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:47.0 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017270
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.9
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
2148 Female, age 91, left hemisphere 24.0
2621 Female, age 67, right hemisphere 22.2
1855 Male, age 76, left hemisphere 21.7
1911 Female, age 85, right hemisphere 19.9
1898 Male, age 80, left hemisphere 19.8
2529 Female, age 94, left hemisphere 18.4
Dentate gyrus
nTPM: 21.1
1927 Female, age 91, both hemispheres 25.6
2530 Female, age 94, left hemisphere 22.5
2531 Female, age 67, both hemispheres 22.4
2010 Male, age 76, both hemispheres 21.1
2528 Male, age 74, both hemispheres 18.0
2246 Female, age 85, both hemispheres 17.1
Entorhinal gyrus
nTPM: 15.6
2613 Female, age 94, left hemisphere 19.7
2686 Male, age 75, right hemisphere 16.1
1787 Male, age 76, left hemisphere 15.1
2764 Male, age 80, right hemisphere 14.5
2117 Female, age 91, right hemisphere 14.3
1938 Female, age 85, left hemisphere 13.7
Hippocampus, CA1
nTPM: 21.6
2749 Male, age 80, left hemisphere 30.4
1873 Female, age 85, both hemispheres 21.1
2045 Male, age 76, both hemispheres 20.7
2082 Female, age 91, right hemisphere 18.1
2527 Male, age 74, both hemispheres 17.7
Hippocampus, CA2
nTPM: 19.2
1963 Male, age 80, left hemisphere 29.3
1892 Male, age 76, both hemispheres 21.0
2113 Female, age 91, right hemisphere 18.4
2437 Female, age 94, left hemisphere 17.3
2249 Male, age 74, both hemispheres 15.2
1940 Female, age 85, left hemisphere 13.7
Hippocampus, CA3
nTPM: 21.9
2137 Male, age 80, left hemisphere 33.3
2861 Female, age 67, both hemispheres 27.6
2620 Female, age 94, left hemisphere 21.0
1867 Male, age 76, both hemispheres 18.5
1891 Female, age 85, both hemispheres 15.9
2436 Male, age 74, both hemispheres 15.3
Parahippocampal cortex
nTPM: 15.4
2245 Female, age 91, both hemispheres 20.4
2622 Female, age 67, right hemisphere 16.4
2018 Male, age 76, both hemispheres 16.3
2250 Female, age 67, right hemisphere 16.3
1990 Female, age 91, right hemisphere 15.0
2693 Female, age 94, both hemispheres 14.9
2692 Male, age 74, both hemispheres 14.5
1933 Female, age 85, both hemispheres 14.0
2532 Female, age 72, left hemisphere 14.0
1850 Male, age 80, both hemispheres 12.5
Perirhinal gyrus
nTPM: 14.1
2521 Female, age 94, right hemisphere 15.7
1847 Female, age 91, left hemisphere 15.4
1841 Female, age 85, right hemisphere 13.4
1794 Male, age 80, right hemisphere 13.0
2848 Male, age 76, right hemisphere 12.7
Subiculum
nTPM: 16.1
2729 Female, age 91, right hemisphere 18.7
1901 Male, age 80, both hemispheres 18.5
2042 Male, age 76, both hemispheres 16.6
1977 Female, age 85, both hemispheres 14.4
2619 Male, age 74, both hemispheres 14.4
2438 Female, age 94, left hemisphere 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 27.2
Min nTPM: 2.5
Std nTPM: 3.8
Median nTPM: 8.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 27.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 20.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 19.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 18.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 18.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 17.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 17.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 17.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 16.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 16.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 16.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 16.9
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 24.5
Min nTPM: 20.6
Sample A Female 24.5
Sample B Female 20.6
Sample C Male 23.2
Sample D Male 21.3
Dorsal hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 30.0
Min nTPM: 24.7
Sample A Female 29.1
Sample B Female 30.0
Sample C Male 24.9
Sample D Male 24.7
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 25.0
Min nTPM: 22.9
Sample A Female 22.9
Sample B Female 24.1
Sample C Male 25.0
Sample D Male 23.3
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 33.2
Min nTPM: 20.9
Sample A Female 21.8
Sample B Female 20.9
Sample C Male 33.2
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.9
Samples: 4

Max nTPM: 50.4
Min nTPM: 43.5
Sample A Male 45.4
Sample B Male 43.5
Sample C Female 44.3
Sample D Female 50.4
Hippocampal formation
nTPM: 47.0
Samples: 4

Max nTPM: 53.3
Min nTPM: 42.4
Sample A Male 42.4
Sample B Male 47.5
Sample C Female 53.3
Sample D Female 44.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
69059951 Antisense, RP_050317_04_F11, Mouse strain C57BL/6J (56 days, male) 12.8
70920051 Antisense, RP_050713_02_F01, Mouse strain C57BL/6J (56 days, male) 0.2

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