HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:13.9 nTPM
HPA Brain:32.2 nTPM
GTEx:13.9 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:25.2 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021374Antibody HPA023161Antibody HPA024631
Glial cells LowLowNot detected
Neuronal cells MediumMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.8
1855 Male, age 76, left hemisphere 37.1
2529 Female, age 94, left hemisphere 33.9
1911 Female, age 85, right hemisphere 31.2
2148 Female, age 91, left hemisphere 30.2
1898 Male, age 80, left hemisphere 27.4
2621 Female, age 67, right hemisphere 25.0
Dentate gyrus
nTPM: 30.5
2530 Female, age 94, left hemisphere 40.5
2010 Male, age 76, both hemispheres 32.0
2528 Male, age 74, both hemispheres 29.7
2246 Female, age 85, both hemispheres 29.4
1927 Female, age 91, both hemispheres 28.0
2531 Female, age 67, both hemispheres 23.4
Entorhinal gyrus
nTPM: 30.8
2117 Female, age 91, right hemisphere 35.5
2764 Male, age 80, right hemisphere 32.7
1787 Male, age 76, left hemisphere 30.9
2686 Male, age 75, right hemisphere 30.4
2613 Female, age 94, left hemisphere 28.5
1938 Female, age 85, left hemisphere 27.0
Hippocampus, CA1
nTPM: 29.5
2082 Female, age 91, right hemisphere 37.3
2527 Male, age 74, both hemispheres 30.7
2749 Male, age 80, left hemisphere 28.7
1873 Female, age 85, both hemispheres 26.5
2045 Male, age 76, both hemispheres 24.3
Hippocampus, CA2
nTPM: 32.2
1940 Female, age 85, left hemisphere 36.7
2113 Female, age 91, right hemisphere 34.0
2437 Female, age 94, left hemisphere 32.9
2249 Male, age 74, both hemispheres 32.5
1963 Male, age 80, left hemisphere 30.8
1892 Male, age 76, both hemispheres 26.3
Hippocampus, CA3
nTPM: 27.2
2436 Male, age 74, both hemispheres 31.5
1891 Female, age 85, both hemispheres 27.6
1867 Male, age 76, both hemispheres 26.8
2620 Female, age 94, left hemisphere 26.5
2861 Female, age 67, both hemispheres 26.5
2137 Male, age 80, left hemisphere 24.6
Parahippocampal cortex
nTPM: 27.5
2693 Female, age 94, both hemispheres 29.7
2692 Male, age 74, both hemispheres 29.5
2532 Female, age 72, left hemisphere 28.6
2622 Female, age 67, right hemisphere 27.9
2245 Female, age 91, both hemispheres 27.7
2018 Male, age 76, both hemispheres 27.6
2250 Female, age 67, right hemisphere 27.4
1990 Female, age 91, right hemisphere 27.3
1933 Female, age 85, both hemispheres 26.2
1850 Male, age 80, both hemispheres 23.6
Perirhinal gyrus
nTPM: 25.7
2521 Female, age 94, right hemisphere 28.4
1794 Male, age 80, right hemisphere 26.5
2848 Male, age 76, right hemisphere 25.3
1847 Female, age 91, left hemisphere 24.7
1841 Female, age 85, right hemisphere 23.5
Subiculum
nTPM: 28.0
2042 Male, age 76, both hemispheres 31.2
2619 Male, age 74, both hemispheres 30.0
2729 Female, age 91, right hemisphere 29.2
1901 Male, age 80, both hemispheres 28.0
1977 Female, age 85, both hemispheres 27.8
2438 Female, age 94, left hemisphere 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 27.6
Min nTPM: 5.7
Std nTPM: 3.7
Median nTPM: 13.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 27.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 26.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 25.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 22.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 22.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 21.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 21.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 21.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 20.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.6
Sample A Female 23.3
Sample B Female 18.7
Sample C Male 21.4
Sample D Male 18.6
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 28.7
Min nTPM: 18.8
Sample A Female 28.7
Sample B Female 26.1
Sample C Male 20.6
Sample D Male 18.8
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 21.1
Min nTPM: 17.9
Sample A Female 19.2
Sample B Female 19.4
Sample C Male 21.1
Sample D Male 17.9
Ventral hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 32.1
Min nTPM: 17.3
Sample A Female 25.8
Sample B Female 17.3
Sample C Male 32.1
Sample D Male 25.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 25.9
Min nTPM: 20.7
Sample A Male 21.8
Sample B Male 20.7
Sample C Female 22.1
Sample D Female 25.9
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 28.8
Min nTPM: 20.8
Sample A Male 20.8
Sample B Male 24.6
Sample C Female 28.8
Sample D Female 26.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
69201696 Antisense, RP_050324_03_B01, Mouse strain C57BL/6J (56 days, male) 5.2
70919340 Antisense, RP_050713_01_B05, Mouse strain C57BL/6J (56 days, male) 0.1

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