HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:37.8 nTPM
HPA Brain:27.9 nTPM
GTEx:37.8 nTPM
FANTOM5:7.3 Scaled Tags Per Million
Pig:46.9 nTPM
Mouse:23.9 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023876
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 22.5
1898 Male, age 80, left hemisphere 26.4
1855 Male, age 76, left hemisphere 24.0
2148 Female, age 91, left hemisphere 22.7
2621 Female, age 67, right hemisphere 22.6
1911 Female, age 85, right hemisphere 21.2
2529 Female, age 94, left hemisphere 18.2
Dentate gyrus
nTPM: 25.8
2530 Female, age 94, left hemisphere 29.1
2010 Male, age 76, both hemispheres 28.1
1927 Female, age 91, both hemispheres 26.5
2528 Male, age 74, both hemispheres 24.6
2531 Female, age 67, both hemispheres 23.6
2246 Female, age 85, both hemispheres 22.6
Entorhinal gyrus
nTPM: 25.4
2613 Female, age 94, left hemisphere 28.9
2764 Male, age 80, right hemisphere 28.6
1787 Male, age 76, left hemisphere 25.2
1938 Female, age 85, left hemisphere 24.9
2686 Male, age 75, right hemisphere 23.7
2117 Female, age 91, right hemisphere 21.0
Hippocampus, CA1
nTPM: 25.8
2749 Male, age 80, left hemisphere 39.2
1873 Female, age 85, both hemispheres 24.2
2082 Female, age 91, right hemisphere 22.3
2045 Male, age 76, both hemispheres 21.6
2527 Male, age 74, both hemispheres 21.6
Hippocampus, CA2
nTPM: 27.9
1963 Male, age 80, left hemisphere 35.0
1892 Male, age 76, both hemispheres 31.9
2437 Female, age 94, left hemisphere 26.7
1940 Female, age 85, left hemisphere 25.4
2249 Male, age 74, both hemispheres 24.9
2113 Female, age 91, right hemisphere 23.8
Hippocampus, CA3
nTPM: 25.2
2137 Male, age 80, left hemisphere 31.1
1867 Male, age 76, both hemispheres 27.5
2861 Female, age 67, both hemispheres 25.3
2620 Female, age 94, left hemisphere 23.6
2436 Male, age 74, both hemispheres 22.1
1891 Female, age 85, both hemispheres 21.7
Parahippocampal cortex
nTPM: 26.2
2532 Female, age 72, left hemisphere 29.8
1933 Female, age 85, both hemispheres 28.8
2250 Female, age 67, right hemisphere 28.7
1990 Female, age 91, right hemisphere 27.7
2693 Female, age 94, both hemispheres 27.1
1850 Male, age 80, both hemispheres 25.1
2018 Male, age 76, both hemispheres 25.1
2245 Female, age 91, both hemispheres 24.6
2622 Female, age 67, right hemisphere 23.5
2692 Male, age 74, both hemispheres 21.9
Perirhinal gyrus
nTPM: 27.3
1841 Female, age 85, right hemisphere 29.7
1847 Female, age 91, left hemisphere 28.7
1794 Male, age 80, right hemisphere 28.1
2521 Female, age 94, right hemisphere 27.0
2848 Male, age 76, right hemisphere 22.9
Subiculum
nTPM: 22.9
1977 Female, age 85, both hemispheres 28.2
1901 Male, age 80, both hemispheres 24.4
2619 Male, age 74, both hemispheres 23.9
2042 Male, age 76, both hemispheres 20.7
2729 Female, age 91, right hemisphere 20.5
2438 Female, age 94, left hemisphere 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.8
Samples: 197

Max nTPM: 89.2
Min nTPM: 14.8
Std nTPM: 13.2
Median nTPM: 35.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 89.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 79.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 76.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 75.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 70.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 68.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 66.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 65.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 61.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.3
FF:10169-103B7 60 years, female 9.3
FF:10153-102I9 76 years, female 5.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.9
Pig sample Sample description nTPM
Subiculum
nTPM: 46.9
Samples: 4

Max nTPM: 86.1
Min nTPM: 31.4
Sample A Female 86.1
Sample B Female 38.5
Sample C Male 31.6
Sample D Male 31.4
Dorsal hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 72.9
Min nTPM: 24.9
Sample A Female 72.9
Sample B Female 31.1
Sample C Male 38.0
Sample D Male 24.9
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 52.3
Min nTPM: 29.9
Sample A Female 52.3
Sample B Female 43.4
Sample C Male 41.4
Sample D Male 29.9
Ventral hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 52.4
Min nTPM: 29.4
Sample A Female 52.4
Sample B Female 29.4
Sample C Male 39.0
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 28.1
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 28.1
Sample C Female 22.2
Sample D Female 22.8
Hippocampal formation
nTPM: 23.9
Samples: 4

Max nTPM: 26.7
Min nTPM: 19.1
Sample A Male 25.7
Sample B Male 19.1
Sample C Female 24.1
Sample D Female 26.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
275680 Antisense, RP_040609_01_B03, Mouse strain C57BL/6J (56 days, male) 2.2

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