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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
244.7
nTPM
FANTOM5:
328.7
Scaled Tags Per Million
Pig:
117.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
244.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 243.9
2301
Female, age 85, both hemispheres
289.9
2188
Female, age 91, both hemispheres
266.7
2090
Male, age 80, both hemispheres
265.7
1984
Male, age 76, both hemispheres
153.4
Dorsal cochlear nucleus nTPM: 203.7
2187
Female, age 91, both hemispheres
240.2
2378
Male, age 80, both hemispheres
222.4
2802
Male, age 74, right hemisphere
203.9
2058
Male, age 76, both hemispheres
177.4
2370
Male, age 61, both hemispheres
174.7
Dorsal tegmental nucleus nTPM: 178.1
2083
Male, age 80, both hemispheres
213.0
2326
Male, age 74, both hemispheres
195.6
1936
Male, age 76, left hemisphere
173.6
2358
Male, age 61, both hemispheres
130.1
Dorsolateral tegmental area nTPM: 199.9
2751
Female, age 85, both hemispheres
291.4
2337
Male, age 61, both hemispheres
222.5
2654
Male, age 80, both hemispheres
221.7
2360
Male, age 74, both hemispheres
140.5
2141
Male, age 76, both hemispheres
123.2
Kolliker-Fuse nucleus nTPM: 197.5
2793
Female, age 91, left hemisphere
250.3
2163
Male, age 80, both hemispheres
179.8
2315
Male, age 76, right hemisphere
162.4
Lateral lemniscal nuclei nTPM: 185.0
2320
Female, age 91, left hemisphere
225.2
2746
Female, age 85, left hemisphere
190.8
2453
Male, age 74, right hemisphere
177.0
2036
Male, age 80, both hemispheres
171.2
2169
Male, age 76, both hemispheres
160.9
Lateral parabrachial nucleus nTPM: 206.6
2792
Male, age 76, both hemispheres
269.6
2013
Male, age 80, both hemispheres
223.1
2790
Male, age 61, both hemispheres
194.7
2139
Female, age 85, right hemisphere
138.8
Lateral vestibular nucleus nTPM: 199.2
2311
Male, age 80, both hemispheres
219.5
2184
Male, age 76, both hemispheres
178.8
Locus coeruleus nTPM: 118.8
2720
Male, age 74, both hemispheres
140.6
2788
Male, age 74, unknown
135.0
2162
Male, age 80, both hemispheres
131.5
2317
Female, age 72, unknown
129.9
2014
Male, age 55, unknown
105.4
2123
Female, age 91, both hemispheres
97.4
1980
Male, age 76, both hemispheres
91.7
Medial parabrachial nucleus nTPM: 216.7
2170
Female, age 91, both hemispheres
257.4
2463
Female, age 85, right hemisphere
230.1
2854
Male, age 80, both hemispheres
219.2
2786
Male, age 76, both hemispheres
198.4
2156
Male, age 61, both hemispheres
178.4
Medial periolivary nuclei nTPM: 193.3
2081
Male, age 80, both hemispheres
257.5
2458
Female, age 91, both hemispheres
230.9
2791
Male, age 74, right hemisphere
187.2
2063
Male, age 76, both hemispheres
156.8
2171
Female, age 85, both hemispheres
133.9
Motor facial nucleus nTPM: 189.5
2126
Male, age 61, both hemispheres
224.2
2697
Female, age 85, both hemispheres
222.1
2795
Female, age 91, both hemispheres
196.5
2365
Male, age 74, right hemisphere
191.2
2327
Male, age 80, both hemispheres
163.4
2062
Male, age 76, both hemispheres
139.6
Motor trigeminal nucleus nTPM: 194.2
2321
Female, age 91, both hemispheres
236.9
2309
Male, age 76, both hemispheres
197.0
2560
Male, age 74, both hemispheres
196.2
2079
Male, age 80, both hemispheres
178.9
2335
Male, age 61, both hemispheres
161.8
Nuclei of the trapezoid body nTPM: 171.9
2166
Male, age 80, both hemispheres
223.3
2368
Female, age 91, both hemispheres
212.0
2159
Male, age 61, both hemispheres
155.5
1983
Male, age 76, both hemispheres
152.9
2735
Female, age 85, both hemispheres
116.0
Nucleus raphe magnus nTPM: 165.4
2459
Female, age 91, both hemispheres
218.9
2051
Male, age 76, both hemispheres
206.0
2328
Male, age 80, both hemispheres
198.5
2455
Male, age 74, both hemispheres
163.8
2160
Male, age 61, both hemispheres
108.3
2172
Female, age 85, both hemispheres
96.8
Paramedian reticular nucleus nTPM: 202.4
2052
Male, age 76, both hemispheres
273.7
2057
Male, age 80, both hemispheres
204.6
2050
Female, age 85, both hemispheres
175.7
2313
Male, age 61, both hemispheres
155.7
Pedunculopontine tegmental nucleus nTPM: 180.9
2338
Male, age 61, both hemispheres
195.2
2334
Male, age 80, both hemispheres
189.0
1921
Female, age 85, both hemispheres
158.6
Pontine nuclei nTPM: 205.9
2454
Male, age 74, left hemisphere
267.0
2319
Female, age 91, both hemispheres
259.6
2109
Female, age 72, unknown
247.9
2115
Male, age 80, left hemisphere
230.2
1863
Male, age 55, unknown
198.3
1968
Male, age 76, left hemisphere
184.4
2727
Male, age 61, right hemisphere
148.1
2787
Female, age 85, both hemispheres
111.7
Pontine raphe nucleus nTPM: 140.1
2853
Male, age 76, midline
146.8
2122
Female, age 85, midline
133.3
Posteroventral cochlear nucleus nTPM: 244.7
2341
Male, age 80, both hemispheres
334.5
2135
Female, age 91, both hemispheres
308.4
2070
Male, age 76, both hemispheres
217.7
2371
Male, age 61, both hemispheres
211.0
2752
Female, age 85, both hemispheres
152.1
Principal sensory trigeminal nucleus nTPM: 185.0
2367
Female, age 91, left hemisphere
264.3
2324
Male, age 76, both hemispheres
182.5
2008
Male, age 80, left hemisphere
162.4
2158
Male, age 61, both hemispheres
130.8
Reticular pontine nucleus, caudal nTPM: 216.7
2559
Male, age 74, both hemispheres
256.3
2457
Female, age 91, both hemispheres
253.2
2092
Male, age 76, both hemispheres
197.0
2332
Male, age 80, right hemisphere
160.4
Reticular pontine nucleus, oral nTPM: 223.8
2361
Male, age 74, both hemispheres
252.1
2366
Female, age 91, both hemispheres
242.9
1939
Male, age 80, both hemispheres
220.2
2167
Male, age 76, both hemispheres
206.9
2012
Female, age 85, both hemispheres
197.1
Reticulotegmental nucleus nTPM: 187.6
2322
Female, age 91, both hemispheres
225.9
2333
Male, age 80, both hemispheres
196.5
2452
Male, age 74, both hemispheres
190.8
2325
Male, age 76, both hemispheres
137.1
Spinal trigeminal nucleus, oral nTPM: 174.1
2164
Male, age 80, both hemispheres
193.8
1978
Male, age 76, both hemispheres
183.2
2737
Female, age 85, both hemispheres
145.2
Subcoeruleus area nTPM: 196.3
2369
Female, age 85, left hemisphere
329.3
1958
Male, age 80, both hemispheres
189.3
2089
Male, age 76, left hemisphere
171.1
2451
Male, age 74, both hemispheres
164.9
2323
Female, age 91, left hemisphere
126.7
Superior olive nTPM: 202.5
2329
Male, age 80, right hemisphere
219.7
2020
Male, age 76, both hemispheres
217.8
2561
Female, age 91, both hemispheres
208.6
2364
Male, age 74, right hemisphere
199.6
1875
Female, age 85, both hemispheres
166.9
Ventral periolivary nuclei nTPM: 173.8
2023
Male, age 76, both hemispheres
226.2
2165
Male, age 80, both hemispheres
173.5
2794
Female, age 91, left hemisphere
173.5
2130
Female, age 85, both hemispheres
122.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 200.3
2456
Female, age 91, both hemispheres
232.2
2359
Male, age 61, both hemispheres
207.9
2840
Female, age 85, both hemispheres
206.7
2161
Male, age 80, both hemispheres
196.9
1959
Male, age 76, both hemispheres
182.1
2449
Male, age 74, both hemispheres
175.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
