HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:23.3 nTPM
HPA Brain:51.4 nTPM
GTEx:23.3 nTPM
FANTOM5:59.7 Scaled Tags Per Million
Pig:48.6 nTPM
Mouse:48.9 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017926Antibody HPA048867
Glial cells Not detectedLow
Neuronal cells MediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.3
1855 Male, age 76, left hemisphere 46.3
1911 Female, age 85, right hemisphere 41.6
2621 Female, age 67, right hemisphere 41.4
1898 Male, age 80, left hemisphere 40.9
2529 Female, age 94, left hemisphere 36.0
2148 Female, age 91, left hemisphere 35.6
Dentate gyrus
nTPM: 41.5
2010 Male, age 76, both hemispheres 47.1
1927 Female, age 91, both hemispheres 44.5
2246 Female, age 85, both hemispheres 42.4
2531 Female, age 67, both hemispheres 42.0
2528 Male, age 74, both hemispheres 37.7
2530 Female, age 94, left hemisphere 35.6
Entorhinal gyrus
nTPM: 38.6
1787 Male, age 76, left hemisphere 43.3
1938 Female, age 85, left hemisphere 42.9
2686 Male, age 75, right hemisphere 42.0
2764 Male, age 80, right hemisphere 41.4
2613 Female, age 94, left hemisphere 33.6
2117 Female, age 91, right hemisphere 28.5
Hippocampus, CA1
nTPM: 45.8
2749 Male, age 80, left hemisphere 54.9
2045 Male, age 76, both hemispheres 54.5
1873 Female, age 85, both hemispheres 45.5
2527 Male, age 74, both hemispheres 37.1
2082 Female, age 91, right hemisphere 37.0
Hippocampus, CA2
nTPM: 40.9
1892 Male, age 76, both hemispheres 57.4
1963 Male, age 80, left hemisphere 38.7
2249 Male, age 74, both hemispheres 38.6
1940 Female, age 85, left hemisphere 38.4
2437 Female, age 94, left hemisphere 37.0
2113 Female, age 91, right hemisphere 35.6
Hippocampus, CA3
nTPM: 45.0
1867 Male, age 76, both hemispheres 55.2
2137 Male, age 80, left hemisphere 51.8
2620 Female, age 94, left hemisphere 45.1
2436 Male, age 74, both hemispheres 41.4
2861 Female, age 67, both hemispheres 38.7
1891 Female, age 85, both hemispheres 38.1
Parahippocampal cortex
nTPM: 43.0
2018 Male, age 76, both hemispheres 50.0
1850 Male, age 80, both hemispheres 48.7
2693 Female, age 94, both hemispheres 45.5
1933 Female, age 85, both hemispheres 45.4
2532 Female, age 72, left hemisphere 44.0
2245 Female, age 91, both hemispheres 43.9
2622 Female, age 67, right hemisphere 40.8
2250 Female, age 67, right hemisphere 40.4
1990 Female, age 91, right hemisphere 37.3
2692 Male, age 74, both hemispheres 34.0
Perirhinal gyrus
nTPM: 51.4
1841 Female, age 85, right hemisphere 53.7
1847 Female, age 91, left hemisphere 52.9
2848 Male, age 76, right hemisphere 52.8
1794 Male, age 80, right hemisphere 52.3
2521 Female, age 94, right hemisphere 45.3
Subiculum
nTPM: 40.7
2042 Male, age 76, both hemispheres 48.1
2438 Female, age 94, left hemisphere 42.4
1977 Female, age 85, both hemispheres 40.6
1901 Male, age 80, both hemispheres 39.7
2729 Female, age 91, right hemisphere 37.6
2619 Male, age 74, both hemispheres 35.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.3
Samples: 197

Max nTPM: 41.0
Min nTPM: 11.2
Std nTPM: 6.7
Median nTPM: 23.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 41.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 39.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 37.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 36.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 36.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 34.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 34.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 34.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.7
FF:10169-103B7 60 years, female 79.9
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.6
Pig sample Sample description nTPM
Subiculum
nTPM: 41.0
Samples: 4

Max nTPM: 44.5
Min nTPM: 36.1
Sample A Female 44.5
Sample B Female 42.0
Sample C Male 41.4
Sample D Male 36.1
Dorsal hippocampus
nTPM: 48.5
Samples: 4

Max nTPM: 59.6
Min nTPM: 38.5
Sample A Female 59.6
Sample B Female 53.7
Sample C Male 42.3
Sample D Male 38.5
Entorhinal cortex
nTPM: 38.1
Samples: 4

Max nTPM: 44.9
Min nTPM: 32.2
Sample A Female 44.9
Sample B Female 38.3
Sample C Male 37.0
Sample D Male 32.2
Ventral hippocampus
nTPM: 48.7
Samples: 4

Max nTPM: 57.0
Min nTPM: 39.1
Sample A Female 47.0
Sample B Female 39.1
Sample C Male 57.0
Sample D Male 51.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.4
Samples: 4

Max nTPM: 48.7
Min nTPM: 41.7
Sample A Male 47.5
Sample B Male 43.8
Sample C Female 41.7
Sample D Female 48.7
Hippocampal formation
nTPM: 48.9
Samples: 4

Max nTPM: 52.0
Min nTPM: 43.6
Sample A Male 52.0
Sample B Male 50.7
Sample C Female 49.2
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
73818810 Antisense, RP_050926_01_E01, Mouse strain C57BL/6J (56 days, male) 2.4
74359670 Antisense, RP_060207_01_A05, Mouse strain C57BL/6J (56 days, male) 0.0

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