HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.4 nTPM
HPA Brain:21.3 nTPM
GTEx:17.4 nTPM
FANTOM5:21.8 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:17.3 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
1855 Male, age 76, left hemisphere 23.9
1911 Female, age 85, right hemisphere 22.8
2621 Female, age 67, right hemisphere 22.6
2148 Female, age 91, left hemisphere 21.2
2529 Female, age 94, left hemisphere 19.4
1898 Male, age 80, left hemisphere 18.1
Dentate gyrus
nTPM: 21.1
2530 Female, age 94, left hemisphere 23.2
2531 Female, age 67, both hemispheres 23.0
2010 Male, age 76, both hemispheres 20.7
2246 Female, age 85, both hemispheres 20.6
2528 Male, age 74, both hemispheres 19.7
1927 Female, age 91, both hemispheres 19.6
Entorhinal gyrus
nTPM: 20.2
2613 Female, age 94, left hemisphere 22.2
2117 Female, age 91, right hemisphere 20.7
2686 Male, age 75, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.5
2764 Male, age 80, right hemisphere 19.9
1938 Female, age 85, left hemisphere 17.0
Hippocampus, CA1
nTPM: 19.6
2082 Female, age 91, right hemisphere 26.5
2045 Male, age 76, both hemispheres 19.5
1873 Female, age 85, both hemispheres 18.6
2527 Male, age 74, both hemispheres 18.2
2749 Male, age 80, left hemisphere 15.3
Hippocampus, CA2
nTPM: 21.3
1940 Female, age 85, left hemisphere 25.6
2113 Female, age 91, right hemisphere 25.6
2437 Female, age 94, left hemisphere 23.6
1963 Male, age 80, left hemisphere 18.8
2249 Male, age 74, both hemispheres 17.4
1892 Male, age 76, both hemispheres 16.7
Hippocampus, CA3
nTPM: 18.5
2861 Female, age 67, both hemispheres 21.9
2137 Male, age 80, left hemisphere 19.2
2620 Female, age 94, left hemisphere 19.0
1891 Female, age 85, both hemispheres 17.6
1867 Male, age 76, both hemispheres 17.3
2436 Male, age 74, both hemispheres 16.0
Parahippocampal cortex
nTPM: 19.5
2622 Female, age 67, right hemisphere 25.0
2018 Male, age 76, both hemispheres 22.0
2250 Female, age 67, right hemisphere 19.9
2693 Female, age 94, both hemispheres 19.7
2245 Female, age 91, both hemispheres 19.6
2532 Female, age 72, left hemisphere 19.3
1990 Female, age 91, right hemisphere 18.6
2692 Male, age 74, both hemispheres 17.5
1933 Female, age 85, both hemispheres 16.7
1850 Male, age 80, both hemispheres 16.5
Perirhinal gyrus
nTPM: 17.2
2521 Female, age 94, right hemisphere 18.4
1847 Female, age 91, left hemisphere 17.7
1794 Male, age 80, right hemisphere 17.2
2848 Male, age 76, right hemisphere 16.9
1841 Female, age 85, right hemisphere 15.9
Subiculum
nTPM: 20.9
2729 Female, age 91, right hemisphere 26.7
2042 Male, age 76, both hemispheres 24.0
2619 Male, age 74, both hemispheres 19.6
2438 Female, age 94, left hemisphere 18.9
1901 Male, age 80, both hemispheres 18.5
1977 Female, age 85, both hemispheres 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 34.4
Min nTPM: 8.4
Std nTPM: 4.5
Median nTPM: 16.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 34.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 29.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 28.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 27.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 27.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 27.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 27.0
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 26.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 26.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 26.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 26.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.8
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.5
Sample A Female 11.1
Sample B Female 8.9
Sample C Male 8.6
Sample D Male 7.5
Dorsal hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.2
Sample A Female 10.8
Sample B Female 8.9
Sample C Male 9.2
Sample D Male 7.2
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 11.7
Min nTPM: 7.8
Sample A Female 9.5
Sample B Female 10.7
Sample C Male 11.7
Sample D Male 7.8
Ventral hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.9
Sample A Female 8.6
Sample B Female 7.9
Sample C Male 12.0
Sample D Male 9.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 17.3
Min nTPM: 14.2
Sample A Male 17.3
Sample B Male 17.1
Sample C Female 16.3
Sample D Female 14.2
Hippocampal formation
nTPM: 17.3
Samples: 4

Max nTPM: 20.4
Min nTPM: 15.2
Sample A Male 15.4
Sample B Male 18.0
Sample C Female 15.2
Sample D Female 20.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
71020892 Antisense, RP_050510_04_F10, Mouse strain C57BL/6J (56 days, male) 1.1

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