HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.6 nTPM
HPA Brain:46.2 nTPM
GTEx:27.6 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:1.8 nTPM
Mouse:0.4 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041070
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.3
2621 Female, age 67, right hemisphere 33.5
1898 Male, age 80, left hemisphere 30.8
2148 Female, age 91, left hemisphere 29.5
2529 Female, age 94, left hemisphere 28.2
1911 Female, age 85, right hemisphere 25.2
1855 Male, age 76, left hemisphere 22.4
Dentate gyrus
nTPM: 28.5
2531 Female, age 67, both hemispheres 35.6
1927 Female, age 91, both hemispheres 34.6
2528 Male, age 74, both hemispheres 28.2
2530 Female, age 94, left hemisphere 28.0
2246 Female, age 85, both hemispheres 23.6
2010 Male, age 76, both hemispheres 21.1
Entorhinal gyrus
nTPM: 42.3
2613 Female, age 94, left hemisphere 57.9
2686 Male, age 75, right hemisphere 45.9
2764 Male, age 80, right hemisphere 44.1
1787 Male, age 76, left hemisphere 40.2
1938 Female, age 85, left hemisphere 38.1
2117 Female, age 91, right hemisphere 27.6
Hippocampus, CA1
nTPM: 30.3
2749 Male, age 80, left hemisphere 37.4
2527 Male, age 74, both hemispheres 32.4
1873 Female, age 85, both hemispheres 28.3
2082 Female, age 91, right hemisphere 27.2
2045 Male, age 76, both hemispheres 26.0
Hippocampus, CA2
nTPM: 32.6
2437 Female, age 94, left hemisphere 54.1
1892 Male, age 76, both hemispheres 33.1
1963 Male, age 80, left hemisphere 33.1
2113 Female, age 91, right hemisphere 27.1
2249 Male, age 74, both hemispheres 26.6
1940 Female, age 85, left hemisphere 21.5
Hippocampus, CA3
nTPM: 32.0
2861 Female, age 67, both hemispheres 40.5
2137 Male, age 80, left hemisphere 36.9
1867 Male, age 76, both hemispheres 31.3
2436 Male, age 74, both hemispheres 30.5
2620 Female, age 94, left hemisphere 28.8
1891 Female, age 85, both hemispheres 24.0
Parahippocampal cortex
nTPM: 44.8
2622 Female, age 67, right hemisphere 65.8
2693 Female, age 94, both hemispheres 56.2
2245 Female, age 91, both hemispheres 52.0
2250 Female, age 67, right hemisphere 49.3
1990 Female, age 91, right hemisphere 44.4
1933 Female, age 85, both hemispheres 41.8
2532 Female, age 72, left hemisphere 37.2
1850 Male, age 80, both hemispheres 34.2
2018 Male, age 76, both hemispheres 34.2
2692 Male, age 74, both hemispheres 32.8
Perirhinal gyrus
nTPM: 46.2
2521 Female, age 94, right hemisphere 51.3
1847 Female, age 91, left hemisphere 48.2
1794 Male, age 80, right hemisphere 45.2
1841 Female, age 85, right hemisphere 45.0
2848 Male, age 76, right hemisphere 41.6
Subiculum
nTPM: 29.3
2619 Male, age 74, both hemispheres 43.9
1977 Female, age 85, both hemispheres 29.8
2438 Female, age 94, left hemisphere 28.1
2729 Female, age 91, right hemisphere 27.4
1901 Male, age 80, both hemispheres 26.7
2042 Male, age 76, both hemispheres 19.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.6
Samples: 197

Max nTPM: 84.8
Min nTPM: 1.4
Std nTPM: 17.9
Median nTPM: 24.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 84.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 83.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 81.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 80.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 68.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 68.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 66.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 65.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 64.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 62.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 62.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.6
FF:10153-102I9 76 years, female 18.6
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.8
Pig sample Sample description nTPM
Subiculum
nTPM: 1.8
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.4
Sample A Female 2.1
Sample B Female 1.9
Sample C Male 1.9
Sample D Male 1.4
Dorsal hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 1.5
Sample C Male 1.4
Sample D Male 1.6
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.4
Sample A Female 1.7
Sample B Female 1.4
Sample C Male 1.5
Sample D Male 1.8
Ventral hippocampus
nTPM: 1.6
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.4
Sample A Female 1.8
Sample B Female 1.8
Sample C Male 1.4
Sample D Male 1.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Male 0.6
Sample B Male 0.4
Sample C Female 0.6
Sample D Female 0.0
Hippocampal formation
nTPM: 0.2
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.1
Sample A Male 0.2
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
72182947 Antisense, RP_051005_02_D12, Mouse strain C57BL/6J (56 days, male) 11.7

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