HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:138.9 nTPM
HPA Brain:306.5 nTPM
GTEx:138.9 nTPM
FANTOM5:583.8 Scaled Tags Per Million
Pig:326.0 nTPM
Mouse:138.1 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038186
Glial cells Low
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 306.5
Sample id Sample description nTPM
Hippocampus
nTPM: 276.2
2148 Female, age 91, left hemisphere 299.7
2621 Female, age 67, right hemisphere 297.7
1855 Male, age 76, left hemisphere 292.1
2529 Female, age 94, left hemisphere 259.3
1898 Male, age 80, left hemisphere 258.0
1911 Female, age 85, right hemisphere 250.1
Dentate gyrus
nTPM: 284.0
2531 Female, age 67, both hemispheres 341.0
2246 Female, age 85, both hemispheres 308.5
2010 Male, age 76, both hemispheres 304.9
2530 Female, age 94, left hemisphere 296.5
1927 Female, age 91, both hemispheres 263.0
2528 Male, age 74, both hemispheres 190.2
Entorhinal gyrus
nTPM: 269.7
1787 Male, age 76, left hemisphere 306.6
1938 Female, age 85, left hemisphere 296.8
2764 Male, age 80, right hemisphere 283.6
2613 Female, age 94, left hemisphere 282.3
2686 Male, age 75, right hemisphere 243.8
2117 Female, age 91, right hemisphere 204.9
Hippocampus, CA1
nTPM: 306.5
2749 Male, age 80, left hemisphere 479.5
2045 Male, age 76, both hemispheres 386.6
1873 Female, age 85, both hemispheres 281.7
2527 Male, age 74, both hemispheres 215.9
2082 Female, age 91, right hemisphere 168.8
Hippocampus, CA2
nTPM: 221.5
1892 Male, age 76, both hemispheres 272.3
1940 Female, age 85, left hemisphere 235.9
1963 Male, age 80, left hemisphere 229.5
2437 Female, age 94, left hemisphere 216.5
2249 Male, age 74, both hemispheres 205.6
2113 Female, age 91, right hemisphere 169.3
Hippocampus, CA3
nTPM: 281.7
2620 Female, age 94, left hemisphere 388.0
2861 Female, age 67, both hemispheres 374.1
2137 Male, age 80, left hemisphere 319.8
1867 Male, age 76, both hemispheres 259.9
1891 Female, age 85, both hemispheres 179.7
2436 Male, age 74, both hemispheres 168.8
Parahippocampal cortex
nTPM: 248.1
2245 Female, age 91, both hemispheres 362.6
1933 Female, age 85, both hemispheres 301.5
2250 Female, age 67, right hemisphere 280.3
2532 Female, age 72, left hemisphere 278.9
2018 Male, age 76, both hemispheres 270.5
2622 Female, age 67, right hemisphere 250.5
1850 Male, age 80, both hemispheres 204.7
2693 Female, age 94, both hemispheres 196.1
1990 Female, age 91, right hemisphere 183.7
2692 Male, age 74, both hemispheres 151.7
Perirhinal gyrus
nTPM: 265.6
2848 Male, age 76, right hemisphere 290.8
2521 Female, age 94, right hemisphere 285.0
1794 Male, age 80, right hemisphere 280.2
1847 Female, age 91, left hemisphere 237.8
1841 Female, age 85, right hemisphere 234.2
Subiculum
nTPM: 224.3
1977 Female, age 85, both hemispheres 272.8
2042 Male, age 76, both hemispheres 272.1
1901 Male, age 80, both hemispheres 226.4
2729 Female, age 91, right hemisphere 212.2
2438 Female, age 94, left hemisphere 197.3
2619 Male, age 74, both hemispheres 165.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 138.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 138.9
Samples: 197

Max nTPM: 386.9
Min nTPM: 0.0
Std nTPM: 81.0
Median nTPM: 137.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 386.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 380.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 376.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 367.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 320.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 313.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 309.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 304.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 291.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 288.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 286.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 583.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 583.8
FF:10169-103B7 60 years, female 664.6
FF:10153-102I9 76 years, female 503.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 326.0
Pig sample Sample description nTPM
Subiculum
nTPM: 279.3
Samples: 4

Max nTPM: 372.5
Min nTPM: 219.4
Sample A Female 372.5
Sample B Female 219.4
Sample C Male 270.8
Sample D Male 254.3
Dorsal hippocampus
nTPM: 319.8
Samples: 4

Max nTPM: 412.3
Min nTPM: 235.0
Sample A Female 412.3
Sample B Female 333.8
Sample C Male 235.0
Sample D Male 297.9
Entorhinal cortex
nTPM: 326.1
Samples: 4

Max nTPM: 363.9
Min nTPM: 256.1
Sample A Female 353.1
Sample B Female 256.1
Sample C Male 363.9
Sample D Male 331.1
Ventral hippocampus
nTPM: 310.0
Samples: 4

Max nTPM: 367.6
Min nTPM: 229.3
Sample A Female 302.5
Sample B Female 229.3
Sample C Male 367.6
Sample D Male 340.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 137.6
Samples: 4

Max nTPM: 148.1
Min nTPM: 118.3
Sample A Male 148.1
Sample B Male 145.1
Sample C Female 118.3
Sample D Female 138.7
Hippocampal formation
nTPM: 138.2
Samples: 4

Max nTPM: 148.7
Min nTPM: 130.8
Sample A Male 130.8
Sample B Male 148.7
Sample C Female 130.8
Sample D Female 142.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
68798711 Antisense, RP_050217_01_B02, Mouse strain C57BL/6J (56 days, male) 10.4

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