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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
160.7
nTPM
FANTOM5:
218.6
Scaled Tags Per Million
Pig:
179.3
nTPM
Allen mouse:
3.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
160.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 97.1
1984
Male, age 76, both hemispheres
134.6
2301
Female, age 85, both hemispheres
119.4
2188
Female, age 91, both hemispheres
78.6
2090
Male, age 80, both hemispheres
55.6
Dorsal cochlear nucleus nTPM: 98.8
2802
Male, age 74, right hemisphere
133.3
2370
Male, age 61, both hemispheres
109.2
2378
Male, age 80, both hemispheres
104.1
2187
Female, age 91, both hemispheres
81.2
2058
Male, age 76, both hemispheres
66.0
Dorsal tegmental nucleus nTPM: 103.1
2358
Male, age 61, both hemispheres
176.8
2083
Male, age 80, both hemispheres
92.1
2326
Male, age 74, both hemispheres
74.1
1936
Male, age 76, left hemisphere
69.4
Dorsolateral tegmental area nTPM: 87.0
2337
Male, age 61, both hemispheres
140.5
2141
Male, age 76, both hemispheres
107.5
2654
Male, age 80, both hemispheres
75.0
2360
Male, age 74, both hemispheres
58.6
2751
Female, age 85, both hemispheres
53.2
Kolliker-Fuse nucleus nTPM: 102.0
2793
Female, age 91, left hemisphere
124.6
2315
Male, age 76, right hemisphere
102.9
2163
Male, age 80, both hemispheres
78.6
Lateral lemniscal nuclei nTPM: 127.7
2169
Male, age 76, both hemispheres
155.1
2453
Male, age 74, right hemisphere
151.3
2746
Female, age 85, left hemisphere
133.6
2320
Female, age 91, left hemisphere
103.7
2036
Male, age 80, both hemispheres
94.7
Lateral parabrachial nucleus nTPM: 90.4
2139
Female, age 85, right hemisphere
130.6
2013
Male, age 80, both hemispheres
87.7
2790
Male, age 61, both hemispheres
77.6
2792
Male, age 76, both hemispheres
65.6
Lateral vestibular nucleus nTPM: 89.8
2311
Male, age 80, both hemispheres
91.1
2184
Male, age 76, both hemispheres
88.4
Locus coeruleus nTPM: 88.6
2720
Male, age 74, both hemispheres
106.4
2014
Male, age 55, unknown
98.9
2123
Female, age 91, both hemispheres
94.7
2317
Female, age 72, unknown
92.0
1980
Male, age 76, both hemispheres
91.8
2162
Male, age 80, both hemispheres
69.7
2788
Male, age 74, unknown
66.8
Medial parabrachial nucleus nTPM: 91.4
2463
Female, age 85, right hemisphere
95.9
2156
Male, age 61, both hemispheres
94.9
2854
Male, age 80, both hemispheres
92.0
2786
Male, age 76, both hemispheres
87.5
2170
Female, age 91, both hemispheres
86.5
Medial periolivary nuclei nTPM: 118.9
2171
Female, age 85, both hemispheres
146.6
2063
Male, age 76, both hemispheres
142.4
2458
Female, age 91, both hemispheres
132.4
2791
Male, age 74, right hemisphere
90.1
2081
Male, age 80, both hemispheres
82.8
Motor facial nucleus nTPM: 160.7
2795
Female, age 91, both hemispheres
225.2
2062
Male, age 76, both hemispheres
183.7
2327
Male, age 80, both hemispheres
179.7
2697
Female, age 85, both hemispheres
149.5
2126
Male, age 61, both hemispheres
113.3
2365
Male, age 74, right hemisphere
112.5
Motor trigeminal nucleus nTPM: 112.7
2335
Male, age 61, both hemispheres
136.2
2321
Female, age 91, both hemispheres
118.3
2560
Male, age 74, both hemispheres
115.8
2079
Male, age 80, both hemispheres
111.2
2309
Male, age 76, both hemispheres
81.9
Nuclei of the trapezoid body nTPM: 156.4
1983
Male, age 76, both hemispheres
200.9
2368
Female, age 91, both hemispheres
169.6
2735
Female, age 85, both hemispheres
166.3
2159
Male, age 61, both hemispheres
133.2
2166
Male, age 80, both hemispheres
112.0
Nucleus raphe magnus nTPM: 155.9
2160
Male, age 61, both hemispheres
176.4
2328
Male, age 80, both hemispheres
168.5
2172
Female, age 85, both hemispheres
164.8
2459
Female, age 91, both hemispheres
150.2
2455
Male, age 74, both hemispheres
148.8
2051
Male, age 76, both hemispheres
126.8
Paramedian reticular nucleus nTPM: 73.9
2313
Male, age 61, both hemispheres
112.7
2050
Female, age 85, both hemispheres
80.6
2057
Male, age 80, both hemispheres
64.3
2052
Male, age 76, both hemispheres
37.9
Pedunculopontine tegmental nucleus nTPM: 89.1
2338
Male, age 61, both hemispheres
105.6
1921
Female, age 85, both hemispheres
90.5
2334
Male, age 80, both hemispheres
71.2
Pontine nuclei nTPM: 128.1
2787
Female, age 85, both hemispheres
177.1
1968
Male, age 76, left hemisphere
156.4
1863
Male, age 55, unknown
140.8
2109
Female, age 72, unknown
137.9
2727
Male, age 61, right hemisphere
133.4
2115
Male, age 80, left hemisphere
118.6
2319
Female, age 91, both hemispheres
82.2
2454
Male, age 74, left hemisphere
78.4
Pontine raphe nucleus nTPM: 111.0
2853
Male, age 76, midline
134.3
2122
Female, age 85, midline
87.8
Posteroventral cochlear nucleus nTPM: 82.1
2371
Male, age 61, both hemispheres
112.9
2070
Male, age 76, both hemispheres
92.2
2341
Male, age 80, both hemispheres
76.8
2752
Female, age 85, both hemispheres
71.9
2135
Female, age 91, both hemispheres
56.7
Principal sensory trigeminal nucleus nTPM: 121.0
2158
Male, age 61, both hemispheres
173.5
2008
Male, age 80, left hemisphere
114.5
2324
Male, age 76, both hemispheres
100.4
2367
Female, age 91, left hemisphere
95.6
Reticular pontine nucleus, caudal nTPM: 133.6
2332
Male, age 80, right hemisphere
195.3
2092
Male, age 76, both hemispheres
140.1
2457
Female, age 91, both hemispheres
128.2
2559
Male, age 74, both hemispheres
70.9
Reticular pontine nucleus, oral nTPM: 78.9
2366
Female, age 91, both hemispheres
88.8
2012
Female, age 85, both hemispheres
87.3
2361
Male, age 74, both hemispheres
78.7
1939
Male, age 80, both hemispheres
70.3
2167
Male, age 76, both hemispheres
69.2
Reticulotegmental nucleus nTPM: 129.5
2322
Female, age 91, both hemispheres
161.0
2325
Male, age 76, both hemispheres
128.3
2452
Male, age 74, both hemispheres
120.0
2333
Male, age 80, both hemispheres
108.9
Spinal trigeminal nucleus, oral nTPM: 116.6
1978
Male, age 76, both hemispheres
127.3
2164
Male, age 80, both hemispheres
114.0
2737
Female, age 85, both hemispheres
108.5
Subcoeruleus area nTPM: 86.7
2089
Male, age 76, left hemisphere
111.4
1958
Male, age 80, both hemispheres
97.6
2323
Female, age 91, left hemisphere
90.5
2451
Male, age 74, both hemispheres
90.5
2369
Female, age 85, left hemisphere
43.2
Superior olive nTPM: 136.5
2329
Male, age 80, right hemisphere
164.0
2561
Female, age 91, both hemispheres
146.7
1875
Female, age 85, both hemispheres
138.8
2020
Male, age 76, both hemispheres
127.2
2364
Male, age 74, right hemisphere
106.1
Ventral periolivary nuclei nTPM: 127.4
2165
Male, age 80, both hemispheres
149.2
2130
Female, age 85, both hemispheres
130.0
2794
Female, age 91, left hemisphere
119.4
2023
Male, age 76, both hemispheres
111.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 126.2
2456
Female, age 91, both hemispheres
157.0
2449
Male, age 74, both hemispheres
144.0
2161
Male, age 80, both hemispheres
141.2
1959
Male, age 76, both hemispheres
140.7
2840
Female, age 85, both hemispheres
100.2
2359
Male, age 61, both hemispheres
74.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
179.3
Pig sample
Sample description
nTPM
Pons nTPM: 179.3
Samples: 4
Max nTPM: 297.5
Min nTPM: 110.9
Sample A
Female
297.5
Sample B
Female
110.9
Sample C
Male
145.7
Sample D
Male
163.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
