HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.3 nTPM
HPA Brain:7.4 nTPM
GTEx:13.3 nTPM
FANTOM5:32.6 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:1.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001251Antibody HPA001551
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.4
Sample id Sample description nTPM
Hippocampus
nTPM: 7.2
1898 Male, age 80, left hemisphere 8.7
1855 Male, age 76, left hemisphere 7.9
2529 Female, age 94, left hemisphere 7.5
2148 Female, age 91, left hemisphere 7.0
1911 Female, age 85, right hemisphere 6.0
2621 Female, age 67, right hemisphere 6.0
Dentate gyrus
nTPM: 6.5
2010 Male, age 76, both hemispheres 9.5
2528 Male, age 74, both hemispheres 8.0
2530 Female, age 94, left hemisphere 6.3
2531 Female, age 67, both hemispheres 5.6
2246 Female, age 85, both hemispheres 5.3
1927 Female, age 91, both hemispheres 4.3
Entorhinal gyrus
nTPM: 4.8
2117 Female, age 91, right hemisphere 8.5
1787 Male, age 76, left hemisphere 6.0
1938 Female, age 85, left hemisphere 5.0
2686 Male, age 75, right hemisphere 4.1
2764 Male, age 80, right hemisphere 3.4
2613 Female, age 94, left hemisphere 1.8
Hippocampus, CA1
nTPM: 5.2
2527 Male, age 74, both hemispheres 6.5
1873 Female, age 85, both hemispheres 6.1
2082 Female, age 91, right hemisphere 5.7
2045 Male, age 76, both hemispheres 5.1
2749 Male, age 80, left hemisphere 2.8
Hippocampus, CA2
nTPM: 7.4
2249 Male, age 74, both hemispheres 14.2
1940 Female, age 85, left hemisphere 8.1
2113 Female, age 91, right hemisphere 6.6
2437 Female, age 94, left hemisphere 6.3
1963 Male, age 80, left hemisphere 5.5
1892 Male, age 76, both hemispheres 3.5
Hippocampus, CA3
nTPM: 5.7
2436 Male, age 74, both hemispheres 9.9
1891 Female, age 85, both hemispheres 5.7
1867 Male, age 76, both hemispheres 5.6
2620 Female, age 94, left hemisphere 4.8
2137 Male, age 80, left hemisphere 4.2
2861 Female, age 67, both hemispheres 3.8
Parahippocampal cortex
nTPM: 5.1
2250 Female, age 67, right hemisphere 9.0
2018 Male, age 76, both hemispheres 7.2
1990 Female, age 91, right hemisphere 5.5
2532 Female, age 72, left hemisphere 5.5
1850 Male, age 80, both hemispheres 4.9
1933 Female, age 85, both hemispheres 4.7
2245 Female, age 91, both hemispheres 4.0
2693 Female, age 94, both hemispheres 3.6
2622 Female, age 67, right hemisphere 3.5
2692 Male, age 74, both hemispheres 3.4
Perirhinal gyrus
nTPM: 5.6
2521 Female, age 94, right hemisphere 7.9
1841 Female, age 85, right hemisphere 6.7
1794 Male, age 80, right hemisphere 5.4
1847 Female, age 91, left hemisphere 4.1
2848 Male, age 76, right hemisphere 4.0
Subiculum
nTPM: 5.3
2729 Female, age 91, right hemisphere 8.9
2042 Male, age 76, both hemispheres 7.1
1901 Male, age 80, both hemispheres 5.3
2619 Male, age 74, both hemispheres 4.6
1977 Female, age 85, both hemispheres 3.5
2438 Female, age 94, left hemisphere 2.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 141.3
Min nTPM: 2.7
Std nTPM: 14.0
Median nTPM: 10.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 141.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 98.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 60.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 58.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 51.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 41.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 38.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 31.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 30.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 29.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.6
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 32.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 14.3
Min nTPM: 8.6
Sample A Female 9.4
Sample B Female 8.6
Sample C Male 11.2
Sample D Male 14.3
Dorsal hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.1
Sample A Female 9.2
Sample B Female 7.2
Sample C Male 10.9
Sample D Male 7.1
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 14.5
Min nTPM: 6.9
Sample A Female 14.5
Sample B Female 8.5
Sample C Male 12.4
Sample D Male 6.9
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 15.7
Min nTPM: 8.2
Sample A Female 10.1
Sample B Female 8.4
Sample C Male 15.7
Sample D Male 8.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.7
Sample A Male 1.1
Sample B Male 1.0
Sample C Female 0.8
Sample D Female 0.7
Hippocampal formation
nTPM: 1.4
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.9
Sample A Male 0.9
Sample B Male 1.2
Sample C Female 1.4
Sample D Female 1.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70813896 Antisense, RP_050725_02_E08, Mouse strain C57BL/6J (56 days, male) 0.4
68191348 Antisense, RP_041129_01_A05, Mouse strain C57BL/6J (56 days, male) 0.3
77874604 Antisense, RP_070219_01_D01, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org