HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:37.1 nTPM
HPA Brain:44.4 nTPM
GTEx:37.1 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:13.1 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006401Antibody HPA072759Antibody CAB004645
Glial cells LowMediumHigh
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.4
Sample id Sample description nTPM
Hippocampus
nTPM: 44.4
1855 Male, age 76, left hemisphere 55.3
2148 Female, age 91, left hemisphere 53.1
2529 Female, age 94, left hemisphere 45.2
1898 Male, age 80, left hemisphere 40.8
1911 Female, age 85, right hemisphere 38.3
2621 Female, age 67, right hemisphere 33.9
Dentate gyrus
nTPM: 32.3
2246 Female, age 85, both hemispheres 34.8
2530 Female, age 94, left hemisphere 34.7
2528 Male, age 74, both hemispheres 34.6
1927 Female, age 91, both hemispheres 33.6
2010 Male, age 76, both hemispheres 33.0
2531 Female, age 67, both hemispheres 23.1
Entorhinal gyrus
nTPM: 37.1
2117 Female, age 91, right hemisphere 52.2
1938 Female, age 85, left hemisphere 40.6
2686 Male, age 75, right hemisphere 40.4
2613 Female, age 94, left hemisphere 31.8
2764 Male, age 80, right hemisphere 31.4
1787 Male, age 76, left hemisphere 26.1
Hippocampus, CA1
nTPM: 37.5
2527 Male, age 74, both hemispheres 45.9
1873 Female, age 85, both hemispheres 37.1
2749 Male, age 80, left hemisphere 36.2
2045 Male, age 76, both hemispheres 34.1
2082 Female, age 91, right hemisphere 34.0
Hippocampus, CA2
nTPM: 37.4
1963 Male, age 80, left hemisphere 43.8
2249 Male, age 74, both hemispheres 40.6
2113 Female, age 91, right hemisphere 37.6
1940 Female, age 85, left hemisphere 37.5
2437 Female, age 94, left hemisphere 35.6
1892 Male, age 76, both hemispheres 29.3
Hippocampus, CA3
nTPM: 39.8
2436 Male, age 74, both hemispheres 69.1
2861 Female, age 67, both hemispheres 36.9
1867 Male, age 76, both hemispheres 34.0
1891 Female, age 85, both hemispheres 34.0
2620 Female, age 94, left hemisphere 32.8
2137 Male, age 80, left hemisphere 31.8
Parahippocampal cortex
nTPM: 38.8
2622 Female, age 67, right hemisphere 54.5
2692 Male, age 74, both hemispheres 53.6
1933 Female, age 85, both hemispheres 44.4
2245 Female, age 91, both hemispheres 39.2
1990 Female, age 91, right hemisphere 35.6
2250 Female, age 67, right hemisphere 35.4
2693 Female, age 94, both hemispheres 32.0
2018 Male, age 76, both hemispheres 31.5
2532 Female, age 72, left hemisphere 30.8
1850 Male, age 80, both hemispheres 30.7
Perirhinal gyrus
nTPM: 30.1
1847 Female, age 91, left hemisphere 37.9
1794 Male, age 80, right hemisphere 33.9
1841 Female, age 85, right hemisphere 32.4
2521 Female, age 94, right hemisphere 27.6
2848 Male, age 76, right hemisphere 18.8
Subiculum
nTPM: 37.4
2729 Female, age 91, right hemisphere 45.0
2619 Male, age 74, both hemispheres 44.2
2042 Male, age 76, both hemispheres 39.4
1901 Male, age 80, both hemispheres 34.1
2438 Female, age 94, left hemisphere 33.3
1977 Female, age 85, both hemispheres 28.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.1
Samples: 197

Max nTPM: 104.4
Min nTPM: 7.7
Std nTPM: 19.6
Median nTPM: 32.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 104.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 104.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 97.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 95.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 91.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 85.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 84.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 81.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 77.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 76.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 76.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10153-102I9 76 years, female 50.9
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.8
Pig sample Sample description nTPM
Subiculum
nTPM: 17.4
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.9
Sample A Female 19.6
Sample B Female 16.1
Sample C Male 15.9
Sample D Male 17.9
Dorsal hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 17.7
Min nTPM: 13.2
Sample A Female 17.7
Sample B Female 13.2
Sample C Male 13.8
Sample D Male 14.4
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 22.6
Min nTPM: 16.1
Sample A Female 18.2
Sample B Female 22.6
Sample C Male 22.4
Sample D Male 16.1
Ventral hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 21.1
Min nTPM: 14.1
Sample A Female 14.1
Sample B Female 15.5
Sample C Male 21.1
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 15.1
Min nTPM: 11.9
Sample A Male 12.4
Sample B Male 11.9
Sample C Female 13.0
Sample D Female 15.1
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 14.1
Min nTPM: 12.1
Sample A Male 12.1
Sample B Male 12.8
Sample C Female 12.2
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69014524 Antisense, RP_050310_01_C07, Mouse strain C57BL/6J (56 days, male) 1.6

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