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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
209.1
nTPM
FANTOM5:
93.9
Scaled Tags Per Million
Pig:
146.3
nTPM
Allen mouse:
9.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
209.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 159.7
2301
Female, age 85, both hemispheres
208.3
2188
Female, age 91, both hemispheres
200.0
2090
Male, age 80, both hemispheres
145.1
1984
Male, age 76, both hemispheres
85.5
Dorsal cochlear nucleus nTPM: 105.1
2058
Male, age 76, both hemispheres
119.8
2378
Male, age 80, both hemispheres
109.1
2187
Female, age 91, both hemispheres
106.7
2370
Male, age 61, both hemispheres
100.6
2802
Male, age 74, right hemisphere
89.3
Dorsal tegmental nucleus nTPM: 115.0
2083
Male, age 80, both hemispheres
145.3
2326
Male, age 74, both hemispheres
120.7
1936
Male, age 76, left hemisphere
114.6
2358
Male, age 61, both hemispheres
79.4
Dorsolateral tegmental area nTPM: 172.6
2360
Male, age 74, both hemispheres
330.5
2141
Male, age 76, both hemispheres
142.9
2751
Female, age 85, both hemispheres
135.9
2654
Male, age 80, both hemispheres
132.7
2337
Male, age 61, both hemispheres
120.9
Kolliker-Fuse nucleus nTPM: 178.8
2793
Female, age 91, left hemisphere
194.0
2163
Male, age 80, both hemispheres
193.5
2315
Male, age 76, right hemisphere
148.9
Lateral lemniscal nuclei nTPM: 145.3
2746
Female, age 85, left hemisphere
181.7
2169
Male, age 76, both hemispheres
163.2
2320
Female, age 91, left hemisphere
147.0
2036
Male, age 80, both hemispheres
127.5
2453
Male, age 74, right hemisphere
107.3
Lateral parabrachial nucleus nTPM: 159.4
2792
Male, age 76, both hemispheres
244.0
2139
Female, age 85, right hemisphere
194.8
2013
Male, age 80, both hemispheres
132.2
2790
Male, age 61, both hemispheres
66.7
Lateral vestibular nucleus nTPM: 194.8
2184
Male, age 76, both hemispheres
233.1
2311
Male, age 80, both hemispheres
156.5
Locus coeruleus nTPM: 209.1
2123
Female, age 91, both hemispheres
351.2
1980
Male, age 76, both hemispheres
257.7
2014
Male, age 55, unknown
206.9
2720
Male, age 74, both hemispheres
173.7
2317
Female, age 72, unknown
167.5
2162
Male, age 80, both hemispheres
162.4
2788
Male, age 74, unknown
144.2
Medial parabrachial nucleus nTPM: 113.2
2854
Male, age 80, both hemispheres
133.4
2463
Female, age 85, right hemisphere
125.6
2156
Male, age 61, both hemispheres
106.7
2786
Male, age 76, both hemispheres
106.3
2170
Female, age 91, both hemispheres
94.2
Medial periolivary nuclei nTPM: 168.8
2171
Female, age 85, both hemispheres
234.3
2063
Male, age 76, both hemispheres
182.6
2081
Male, age 80, both hemispheres
154.0
2791
Male, age 74, right hemisphere
142.2
2458
Female, age 91, both hemispheres
131.0
Motor facial nucleus nTPM: 159.9
2697
Female, age 85, both hemispheres
241.0
2062
Male, age 76, both hemispheres
172.6
2365
Male, age 74, right hemisphere
161.7
2126
Male, age 61, both hemispheres
153.6
2327
Male, age 80, both hemispheres
138.1
2795
Female, age 91, both hemispheres
92.2
Motor trigeminal nucleus nTPM: 117.8
2079
Male, age 80, both hemispheres
160.6
2309
Male, age 76, both hemispheres
115.3
2321
Female, age 91, both hemispheres
109.2
2560
Male, age 74, both hemispheres
103.7
2335
Male, age 61, both hemispheres
100.3
Nuclei of the trapezoid body nTPM: 164.9
2735
Female, age 85, both hemispheres
194.0
1983
Male, age 76, both hemispheres
183.9
2166
Male, age 80, both hemispheres
176.5
2159
Male, age 61, both hemispheres
161.8
2368
Female, age 91, both hemispheres
108.4
Nucleus raphe magnus nTPM: 159.1
2172
Female, age 85, both hemispheres
219.0
2328
Male, age 80, both hemispheres
163.2
2051
Male, age 76, both hemispheres
159.4
2160
Male, age 61, both hemispheres
153.4
2455
Male, age 74, both hemispheres
136.0
2459
Female, age 91, both hemispheres
123.7
Paramedian reticular nucleus nTPM: 149.6
2050
Female, age 85, both hemispheres
184.1
2313
Male, age 61, both hemispheres
158.5
2057
Male, age 80, both hemispheres
149.7
2052
Male, age 76, both hemispheres
106.2
Pedunculopontine tegmental nucleus nTPM: 113.0
2334
Male, age 80, both hemispheres
154.8
1921
Female, age 85, both hemispheres
101.7
2338
Male, age 61, both hemispheres
82.6
Pontine nuclei nTPM: 157.3
2787
Female, age 85, both hemispheres
199.3
2454
Male, age 74, left hemisphere
184.5
2319
Female, age 91, both hemispheres
177.6
1968
Male, age 76, left hemisphere
168.3
2115
Male, age 80, left hemisphere
157.1
2109
Female, age 72, unknown
148.4
2727
Male, age 61, right hemisphere
112.3
1863
Male, age 55, unknown
111.2
Pontine raphe nucleus nTPM: 150.5
2122
Female, age 85, midline
169.3
2853
Male, age 76, midline
131.8
Posteroventral cochlear nucleus nTPM: 149.8
2135
Female, age 91, both hemispheres
237.8
2070
Male, age 76, both hemispheres
146.6
2341
Male, age 80, both hemispheres
146.6
2752
Female, age 85, both hemispheres
113.4
2371
Male, age 61, both hemispheres
104.6
Principal sensory trigeminal nucleus nTPM: 162.7
2324
Male, age 76, both hemispheres
205.8
2367
Female, age 91, left hemisphere
159.1
2158
Male, age 61, both hemispheres
156.2
2008
Male, age 80, left hemisphere
129.8
Reticular pontine nucleus, caudal nTPM: 152.5
2092
Male, age 76, both hemispheres
203.1
2457
Female, age 91, both hemispheres
151.9
2332
Male, age 80, right hemisphere
130.5
2559
Male, age 74, both hemispheres
124.5
Reticular pontine nucleus, oral nTPM: 139.1
2366
Female, age 91, both hemispheres
180.5
2012
Female, age 85, both hemispheres
149.7
2361
Male, age 74, both hemispheres
139.6
1939
Male, age 80, both hemispheres
116.5
2167
Male, age 76, both hemispheres
109.2
Reticulotegmental nucleus nTPM: 115.0
2325
Male, age 76, both hemispheres
132.5
2333
Male, age 80, both hemispheres
130.4
2452
Male, age 74, both hemispheres
105.0
2322
Female, age 91, both hemispheres
92.3
Spinal trigeminal nucleus, oral nTPM: 151.9
2164
Male, age 80, both hemispheres
207.6
2737
Female, age 85, both hemispheres
140.3
1978
Male, age 76, both hemispheres
107.7
Subcoeruleus area nTPM: 114.4
2089
Male, age 76, left hemisphere
147.7
2369
Female, age 85, left hemisphere
134.2
1958
Male, age 80, both hemispheres
120.8
2323
Female, age 91, left hemisphere
92.7
2451
Male, age 74, both hemispheres
76.5
Superior olive nTPM: 164.0
2020
Male, age 76, both hemispheres
195.4
1875
Female, age 85, both hemispheres
179.6
2364
Male, age 74, right hemisphere
166.4
2329
Male, age 80, right hemisphere
159.0
2561
Female, age 91, both hemispheres
119.4
Ventral periolivary nuclei nTPM: 179.7
2130
Female, age 85, both hemispheres
231.2
2023
Male, age 76, both hemispheres
202.6
2165
Male, age 80, both hemispheres
191.7
2794
Female, age 91, left hemisphere
93.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 142.0
1959
Male, age 76, both hemispheres
182.2
2840
Female, age 85, both hemispheres
160.1
2161
Male, age 80, both hemispheres
141.0
2449
Male, age 74, both hemispheres
131.1
2456
Female, age 91, both hemispheres
125.6
2359
Male, age 61, both hemispheres
111.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
146.3
Pig sample
Sample description
nTPM
Pons nTPM: 146.3
Samples: 4
Max nTPM: 185.1
Min nTPM: 108.2
Sample A
Female
111.8
Sample B
Female
108.2
Sample C
Male
179.9
Sample D
Male
185.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
