HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.0 nTPM
HPA Brain:8.3 nTPM
GTEx:12.0 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:25.4 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028589
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.3
Sample id Sample description nTPM
Hippocampus
nTPM: 8.3
1898 Male, age 80, left hemisphere 11.5
2148 Female, age 91, left hemisphere 9.3
2621 Female, age 67, right hemisphere 8.6
2529 Female, age 94, left hemisphere 8.2
1911 Female, age 85, right hemisphere 7.5
1855 Male, age 76, left hemisphere 4.7
Dentate gyrus
nTPM: 6.9
2528 Male, age 74, both hemispheres 8.3
1927 Female, age 91, both hemispheres 8.0
2010 Male, age 76, both hemispheres 7.6
2530 Female, age 94, left hemisphere 6.8
2246 Female, age 85, both hemispheres 5.8
2531 Female, age 67, both hemispheres 4.8
Entorhinal gyrus
nTPM: 7.7
2686 Male, age 75, right hemisphere 10.1
2117 Female, age 91, right hemisphere 9.1
1938 Female, age 85, left hemisphere 8.2
1787 Male, age 76, left hemisphere 7.6
2764 Male, age 80, right hemisphere 6.1
2613 Female, age 94, left hemisphere 4.9
Hippocampus, CA1
nTPM: 7.4
2749 Male, age 80, left hemisphere 10.5
2045 Male, age 76, both hemispheres 7.0
1873 Female, age 85, both hemispheres 6.9
2527 Male, age 74, both hemispheres 6.9
2082 Female, age 91, right hemisphere 5.8
Hippocampus, CA2
nTPM: 6.7
1892 Male, age 76, both hemispheres 7.7
1963 Male, age 80, left hemisphere 7.4
2437 Female, age 94, left hemisphere 6.5
2249 Male, age 74, both hemispheres 6.4
1940 Female, age 85, left hemisphere 6.3
2113 Female, age 91, right hemisphere 5.5
Hippocampus, CA3
nTPM: 7.9
2137 Male, age 80, left hemisphere 9.1
2620 Female, age 94, left hemisphere 8.6
2861 Female, age 67, both hemispheres 8.2
1867 Male, age 76, both hemispheres 7.8
2436 Male, age 74, both hemispheres 7.6
1891 Female, age 85, both hemispheres 6.2
Parahippocampal cortex
nTPM: 7.4
2250 Female, age 67, right hemisphere 9.0
1933 Female, age 85, both hemispheres 8.0
2692 Male, age 74, both hemispheres 7.9
2018 Male, age 76, both hemispheres 7.6
1850 Male, age 80, both hemispheres 7.3
2693 Female, age 94, both hemispheres 7.2
1990 Female, age 91, right hemisphere 7.1
2622 Female, age 67, right hemisphere 7.1
2245 Female, age 91, both hemispheres 6.8
2532 Female, age 72, left hemisphere 6.1
Perirhinal gyrus
nTPM: 6.7
1794 Male, age 80, right hemisphere 8.8
1847 Female, age 91, left hemisphere 7.6
2521 Female, age 94, right hemisphere 6.1
1841 Female, age 85, right hemisphere 5.6
2848 Male, age 76, right hemisphere 5.5
Subiculum
nTPM: 6.7
1901 Male, age 80, both hemispheres 8.6
1977 Female, age 85, both hemispheres 8.0
2619 Male, age 74, both hemispheres 7.9
2042 Male, age 76, both hemispheres 6.5
2729 Female, age 91, right hemisphere 6.0
2438 Female, age 94, left hemisphere 3.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 24.7
Min nTPM: 4.5
Std nTPM: 3.9
Median nTPM: 11.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 24.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 22.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 21.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 21.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 21.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 21.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 20.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 19.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10169-103B7 60 years, female 12.4
FF:10153-102I9 76 years, female 11.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 17.8
Min nTPM: 10.4
Sample A Female 17.8
Sample B Female 10.4
Sample C Male 12.0
Sample D Male 12.4
Dorsal hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.4
Sample A Female 19.4
Sample B Female 15.6
Sample C Male 13.4
Sample D Male 18.4
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.3
Sample A Female 16.0
Sample B Female 17.7
Sample C Male 14.4
Sample D Male 12.3
Ventral hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 12.7
Sample A Female 13.6
Sample B Female 12.7
Sample C Male 17.1
Sample D Male 16.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 25.7
Min nTPM: 19.6
Sample A Male 20.0
Sample B Male 25.7
Sample C Female 23.4
Sample D Female 19.6
Hippocampal formation
nTPM: 25.4
Samples: 4

Max nTPM: 26.7
Min nTPM: 22.2
Sample A Male 22.2
Sample B Male 26.0
Sample C Female 26.7
Sample D Female 26.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68666529 Antisense, RP_050126_02_D12, Mouse strain C57BL/6J (56 days, male) 2.8

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