HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:4.7 nTPM
HPA Brain:16.8 nTPM
GTEx:4.7 nTPM
FANTOM5:77.8 Scaled Tags Per Million
Pig:21.2 nTPM
Mouse:39.1 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050423
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.8
1855 Male, age 76, left hemisphere 19.5
1898 Male, age 80, left hemisphere 18.6
1911 Female, age 85, right hemisphere 17.1
2621 Female, age 67, right hemisphere 14.0
2529 Female, age 94, left hemisphere 13.2
2148 Female, age 91, left hemisphere 12.3
Dentate gyrus
nTPM: 15.6
2010 Male, age 76, both hemispheres 17.7
2528 Male, age 74, both hemispheres 17.1
1927 Female, age 91, both hemispheres 16.5
2530 Female, age 94, left hemisphere 15.6
2246 Female, age 85, both hemispheres 13.9
2531 Female, age 67, both hemispheres 12.8
Entorhinal gyrus
nTPM: 15.7
2117 Female, age 91, right hemisphere 18.1
1938 Female, age 85, left hemisphere 16.8
2613 Female, age 94, left hemisphere 16.8
2764 Male, age 80, right hemisphere 15.7
2686 Male, age 75, right hemisphere 13.6
1787 Male, age 76, left hemisphere 13.4
Hippocampus, CA1
nTPM: 16.1
2749 Male, age 80, left hemisphere 21.0
1873 Female, age 85, both hemispheres 17.4
2527 Male, age 74, both hemispheres 14.6
2082 Female, age 91, right hemisphere 14.4
2045 Male, age 76, both hemispheres 13.1
Hippocampus, CA2
nTPM: 16.8
1963 Male, age 80, left hemisphere 20.1
1940 Female, age 85, left hemisphere 18.3
2249 Male, age 74, both hemispheres 18.1
1892 Male, age 76, both hemispheres 16.9
2113 Female, age 91, right hemisphere 15.1
2437 Female, age 94, left hemisphere 12.0
Hippocampus, CA3
nTPM: 15.4
1891 Female, age 85, both hemispheres 20.3
2137 Male, age 80, left hemisphere 18.3
1867 Male, age 76, both hemispheres 16.5
2436 Male, age 74, both hemispheres 15.7
2620 Female, age 94, left hemisphere 11.9
2861 Female, age 67, both hemispheres 9.3
Parahippocampal cortex
nTPM: 14.8
1850 Male, age 80, both hemispheres 18.0
1990 Female, age 91, right hemisphere 17.1
2693 Female, age 94, both hemispheres 17.0
1933 Female, age 85, both hemispheres 16.0
2532 Female, age 72, left hemisphere 15.4
2692 Male, age 74, both hemispheres 14.8
2018 Male, age 76, both hemispheres 14.4
2245 Female, age 91, both hemispheres 14.4
2250 Female, age 67, right hemisphere 12.2
2622 Female, age 67, right hemisphere 8.8
Perirhinal gyrus
nTPM: 15.6
2521 Female, age 94, right hemisphere 17.4
1841 Female, age 85, right hemisphere 16.2
2848 Male, age 76, right hemisphere 15.1
1794 Male, age 80, right hemisphere 14.8
1847 Female, age 91, left hemisphere 14.7
Subiculum
nTPM: 16.5
1901 Male, age 80, both hemispheres 22.3
2042 Male, age 76, both hemispheres 19.8
1977 Female, age 85, both hemispheres 17.7
2729 Female, age 91, right hemisphere 15.0
2619 Male, age 74, both hemispheres 13.7
2438 Female, age 94, left hemisphere 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.7
Samples: 197

Max nTPM: 13.6
Min nTPM: 0.6
Std nTPM: 2.3
Median nTPM: 4.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 13.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 13.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 11.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 11.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 10.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 10.0
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 9.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 9.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 9.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 9.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 8.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.8
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 68.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.2
Pig sample Sample description nTPM
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 24.9
Min nTPM: 17.4
Sample A Female 24.9
Sample B Female 19.9
Sample C Male 17.4
Sample D Male 18.2
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 23.8
Min nTPM: 14.9
Sample A Female 23.8
Sample B Female 22.4
Sample C Male 20.4
Sample D Male 14.9
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 23.7
Min nTPM: 16.3
Sample A Female 21.1
Sample B Female 22.9
Sample C Male 23.7
Sample D Male 16.3
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 25.1
Min nTPM: 16.9
Sample A Female 21.7
Sample B Female 16.9
Sample C Male 25.1
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 41.8
Min nTPM: 37.5
Sample A Male 38.4
Sample B Male 38.8
Sample C Female 37.5
Sample D Female 41.8
Hippocampal formation
nTPM: 37.5
Samples: 4

Max nTPM: 38.6
Min nTPM: 36.5
Sample A Male 37.4
Sample B Male 37.5
Sample C Female 38.6
Sample D Female 36.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
1063 Antisense, RP_Baylor_103361, Mouse strain C57BL/6J (56 days, male) 3.8
1064 Antisense, RP_Baylor_103361, Mouse strain C57BL/6J (56 days, male) 2.9

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