HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:8.0 nTPM
HPA Brain:45.7 nTPM
GTEx:8.0 nTPM
FANTOM5:36.3 Scaled Tags Per Million
Pig:14.3 nTPM
Mouse:18.4 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021527
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 44.3
2148 Female, age 91, left hemisphere 49.5
2529 Female, age 94, left hemisphere 48.7
1898 Male, age 80, left hemisphere 44.4
1911 Female, age 85, right hemisphere 42.4
2621 Female, age 67, right hemisphere 42.1
1855 Male, age 76, left hemisphere 38.9
Dentate gyrus
nTPM: 42.2
2531 Female, age 67, both hemispheres 47.7
2530 Female, age 94, left hemisphere 46.9
1927 Female, age 91, both hemispheres 42.1
2528 Male, age 74, both hemispheres 41.2
2010 Male, age 76, both hemispheres 37.7
2246 Female, age 85, both hemispheres 37.4
Entorhinal gyrus
nTPM: 45.7
2117 Female, age 91, right hemisphere 51.6
2764 Male, age 80, right hemisphere 48.6
2686 Male, age 75, right hemisphere 47.4
2613 Female, age 94, left hemisphere 44.0
1938 Female, age 85, left hemisphere 42.0
1787 Male, age 76, left hemisphere 40.6
Hippocampus, CA1
nTPM: 42.1
2749 Male, age 80, left hemisphere 45.9
2082 Female, age 91, right hemisphere 43.2
2045 Male, age 76, both hemispheres 41.1
1873 Female, age 85, both hemispheres 41.0
2527 Male, age 74, both hemispheres 39.4
Hippocampus, CA2
nTPM: 44.1
1963 Male, age 80, left hemisphere 50.5
2113 Female, age 91, right hemisphere 45.8
1940 Female, age 85, left hemisphere 45.5
2437 Female, age 94, left hemisphere 43.4
1892 Male, age 76, both hemispheres 40.5
2249 Male, age 74, both hemispheres 39.0
Hippocampus, CA3
nTPM: 44.3
2137 Male, age 80, left hemisphere 47.1
2861 Female, age 67, both hemispheres 45.2
2620 Female, age 94, left hemisphere 44.9
1891 Female, age 85, both hemispheres 44.0
2436 Male, age 74, both hemispheres 42.4
1867 Male, age 76, both hemispheres 42.1
Parahippocampal cortex
nTPM: 41.6
1990 Female, age 91, right hemisphere 46.0
2245 Female, age 91, both hemispheres 43.5
1933 Female, age 85, both hemispheres 42.4
2250 Female, age 67, right hemisphere 41.5
2532 Female, age 72, left hemisphere 41.1
2692 Male, age 74, both hemispheres 40.8
2018 Male, age 76, both hemispheres 40.6
1850 Male, age 80, both hemispheres 40.4
2622 Female, age 67, right hemisphere 40.1
2693 Female, age 94, both hemispheres 39.2
Perirhinal gyrus
nTPM: 40.6
1847 Female, age 91, left hemisphere 41.9
1794 Male, age 80, right hemisphere 41.8
1841 Female, age 85, right hemisphere 40.9
2521 Female, age 94, right hemisphere 40.6
2848 Male, age 76, right hemisphere 37.8
Subiculum
nTPM: 41.0
2729 Female, age 91, right hemisphere 43.9
1901 Male, age 80, both hemispheres 43.2
1977 Female, age 85, both hemispheres 43.2
2042 Male, age 76, both hemispheres 41.1
2619 Male, age 74, both hemispheres 39.1
2438 Female, age 94, left hemisphere 35.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.0
Samples: 197

Max nTPM: 16.0
Min nTPM: 1.5
Std nTPM: 2.8
Median nTPM: 7.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 16.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 14.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 14.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 13.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 13.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 13.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 13.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 12.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 12.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 12.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.3
FF:10153-102I9 76 years, female 43.6
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.3
Pig sample Sample description nTPM
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.1
Sample A Female 17.0
Sample B Female 12.2
Sample C Male 13.0
Sample D Male 11.1
Dorsal hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 15.8
Min nTPM: 11.1
Sample A Female 15.8
Sample B Female 13.7
Sample C Male 13.5
Sample D Male 11.1
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 13.4
Sample A Female 15.0
Sample B Female 14.2
Sample C Male 14.7
Sample D Male 13.4
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.8
Sample A Female 12.9
Sample B Female 10.8
Sample C Male 15.6
Sample D Male 14.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 22.3
Min nTPM: 14.9
Sample A Male 14.9
Sample B Male 18.8
Sample C Female 22.3
Sample D Female 15.5
Hippocampal formation
nTPM: 18.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 17.1
Sample A Male 18.1
Sample B Male 20.7
Sample C Female 17.1
Sample D Female 17.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
666 Antisense, RP_Baylor_253935, Mouse strain C57BL/6J (56 days, male) 7.7
665 Antisense, RP_Baylor_253935, Mouse strain C57BL/6J (56 days, male) 5.8

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