HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.2 nTPM
HPA Brain:14.5 nTPM
GTEx:20.2 nTPM
FANTOM5:13.4 Scaled Tags Per Million
Pig:4.6 nTPM
Mouse:4.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021439Antibody HPA065287
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.8
1898 Male, age 80, left hemisphere 13.3
2148 Female, age 91, left hemisphere 12.6
1855 Male, age 76, left hemisphere 11.1
2621 Female, age 67, right hemisphere 10.9
1911 Female, age 85, right hemisphere 9.3
2529 Female, age 94, left hemisphere 7.4
Dentate gyrus
nTPM: 12.8
1927 Female, age 91, both hemispheres 16.7
2010 Male, age 76, both hemispheres 14.2
2530 Female, age 94, left hemisphere 13.9
2246 Female, age 85, both hemispheres 13.1
2528 Male, age 74, both hemispheres 10.8
2531 Female, age 67, both hemispheres 7.8
Entorhinal gyrus
nTPM: 6.9
1787 Male, age 76, left hemisphere 8.2
1938 Female, age 85, left hemisphere 7.5
2764 Male, age 80, right hemisphere 7.3
2117 Female, age 91, right hemisphere 6.2
2613 Female, age 94, left hemisphere 6.1
2686 Male, age 75, right hemisphere 5.9
Hippocampus, CA1
nTPM: 13.5
2749 Male, age 80, left hemisphere 18.6
2082 Female, age 91, right hemisphere 16.8
2045 Male, age 76, both hemispheres 13.4
1873 Female, age 85, both hemispheres 10.1
2527 Male, age 74, both hemispheres 8.6
Hippocampus, CA2
nTPM: 14.5
2249 Male, age 74, both hemispheres 19.5
1892 Male, age 76, both hemispheres 18.3
1963 Male, age 80, left hemisphere 15.6
1940 Female, age 85, left hemisphere 12.8
2113 Female, age 91, right hemisphere 10.8
2437 Female, age 94, left hemisphere 10.0
Hippocampus, CA3
nTPM: 12.8
2436 Male, age 74, both hemispheres 17.0
1867 Male, age 76, both hemispheres 15.4
2137 Male, age 80, left hemisphere 15.4
2620 Female, age 94, left hemisphere 11.7
2861 Female, age 67, both hemispheres 8.8
1891 Female, age 85, both hemispheres 8.2
Parahippocampal cortex
nTPM: 7.8
2622 Female, age 67, right hemisphere 10.1
2245 Female, age 91, both hemispheres 9.6
2018 Male, age 76, both hemispheres 8.9
2250 Female, age 67, right hemisphere 8.5
1990 Female, age 91, right hemisphere 7.4
1850 Male, age 80, both hemispheres 7.1
1933 Female, age 85, both hemispheres 7.0
2692 Male, age 74, both hemispheres 6.9
2532 Female, age 72, left hemisphere 6.6
2693 Female, age 94, both hemispheres 5.6
Perirhinal gyrus
nTPM: 8.1
1847 Female, age 91, left hemisphere 8.9
1794 Male, age 80, right hemisphere 8.5
2521 Female, age 94, right hemisphere 7.8
1841 Female, age 85, right hemisphere 7.7
2848 Male, age 76, right hemisphere 7.6
Subiculum
nTPM: 8.5
1901 Male, age 80, both hemispheres 12.5
2042 Male, age 76, both hemispheres 8.6
2438 Female, age 94, left hemisphere 8.5
2729 Female, age 91, right hemisphere 8.4
1977 Female, age 85, both hemispheres 7.4
2619 Male, age 74, both hemispheres 6.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.2
Samples: 197

Max nTPM: 101.0
Min nTPM: 3.8
Std nTPM: 11.4
Median nTPM: 19.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 101.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 64.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 52.3
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 51.8
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 51.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 47.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 43.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 42.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 38.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 38.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.4
FF:10169-103B7 60 years, female 19.7
FF:10153-102I9 76 years, female 7.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.6
Pig sample Sample description nTPM
Subiculum
nTPM: 3.4
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.7
Sample A Female 3.7
Sample B Female 3.3
Sample C Male 2.7
Sample D Male 3.7
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 7.2
Min nTPM: 1.8
Sample A Female 7.2
Sample B Female 4.4
Sample C Male 4.5
Sample D Male 1.8
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 4.2
Min nTPM: 1.9
Sample A Female 4.2
Sample B Female 2.3
Sample C Male 3.2
Sample D Male 1.9
Ventral hippocampus
nTPM: 4.6
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.0
Sample A Female 4.6
Sample B Female 3.0
Sample C Male 5.7
Sample D Male 5.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.9
Sample A Male 3.2
Sample B Male 3.5
Sample C Female 2.4
Sample D Female 1.9
Hippocampal formation
nTPM: 4.7
Samples: 4

Max nTPM: 6.5
Min nTPM: 3.1
Sample A Male 3.1
Sample B Male 3.8
Sample C Female 6.5
Sample D Female 5.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71492850 Antisense, RP_050913_01_F08, Mouse strain C57BL/6J (56 days, male) 0.0

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