HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:412.0 nTPM
HPA Brain:110.8 nTPM
GTEx:412.0 nTPM
FANTOM5:260.2 Scaled Tags Per Million
Pig:115.8 nTPM
Mouse:7.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 110.8
Sample id Sample description nTPM
Hippocampus
nTPM: 99.6
2529 Female, age 94, left hemisphere 122.7
2621 Female, age 67, right hemisphere 114.4
1911 Female, age 85, right hemisphere 106.1
1898 Male, age 80, left hemisphere 98.4
2148 Female, age 91, left hemisphere 80.2
1855 Male, age 76, left hemisphere 76.0
Dentate gyrus
nTPM: 110.8
2530 Female, age 94, left hemisphere 240.3
2246 Female, age 85, both hemispheres 103.2
2531 Female, age 67, both hemispheres 101.4
2528 Male, age 74, both hemispheres 97.6
2010 Male, age 76, both hemispheres 78.3
1927 Female, age 91, both hemispheres 44.2
Entorhinal gyrus
nTPM: 102.8
2686 Male, age 75, right hemisphere 153.7
2117 Female, age 91, right hemisphere 143.7
2764 Male, age 80, right hemisphere 94.1
1787 Male, age 76, left hemisphere 77.8
2613 Female, age 94, left hemisphere 75.0
1938 Female, age 85, left hemisphere 72.4
Hippocampus, CA1
nTPM: 78.7
2082 Female, age 91, right hemisphere 92.9
1873 Female, age 85, both hemispheres 91.9
2527 Male, age 74, both hemispheres 90.0
2749 Male, age 80, left hemisphere 74.0
2045 Male, age 76, both hemispheres 44.6
Hippocampus, CA2
nTPM: 91.3
1963 Male, age 80, left hemisphere 130.1
2437 Female, age 94, left hemisphere 113.6
2249 Male, age 74, both hemispheres 107.3
2113 Female, age 91, right hemisphere 79.2
1940 Female, age 85, left hemisphere 70.5
1892 Male, age 76, both hemispheres 47.4
Hippocampus, CA3
nTPM: 68.8
1891 Female, age 85, both hemispheres 89.8
2861 Female, age 67, both hemispheres 88.4
1867 Male, age 76, both hemispheres 63.9
2620 Female, age 94, left hemisphere 59.3
2436 Male, age 74, both hemispheres 56.2
2137 Male, age 80, left hemisphere 55.4
Parahippocampal cortex
nTPM: 78.2
2532 Female, age 72, left hemisphere 119.0
2692 Male, age 74, both hemispheres 117.4
2622 Female, age 67, right hemisphere 90.2
2245 Female, age 91, both hemispheres 80.1
1933 Female, age 85, both hemispheres 76.0
1990 Female, age 91, right hemisphere 74.6
2018 Male, age 76, both hemispheres 70.1
2250 Female, age 67, right hemisphere 52.7
1850 Male, age 80, both hemispheres 51.4
2693 Female, age 94, both hemispheres 50.8
Perirhinal gyrus
nTPM: 53.1
1794 Male, age 80, right hemisphere 67.3
2848 Male, age 76, right hemisphere 62.5
1847 Female, age 91, left hemisphere 50.9
1841 Female, age 85, right hemisphere 46.4
2521 Female, age 94, right hemisphere 38.3
Subiculum
nTPM: 110.8
2042 Male, age 76, both hemispheres 144.2
2438 Female, age 94, left hemisphere 122.0
1977 Female, age 85, both hemispheres 108.1
1901 Male, age 80, both hemispheres 103.6
2619 Male, age 74, both hemispheres 100.4
2729 Female, age 91, right hemisphere 86.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 412.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 412.0
Samples: 197

Max nTPM: 1746.2
Min nTPM: 21.9
Std nTPM: 247.0
Median nTPM: 364.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1746.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1440.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 1173.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1065.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1036.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1009.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 966.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 962.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 944.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 931.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 860.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 260.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 260.2
FF:10153-102I9 76 years, female 309.6
FF:10169-103B7 60 years, female 210.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.8
Pig sample Sample description nTPM
Subiculum
nTPM: 62.4
Samples: 4

Max nTPM: 69.8
Min nTPM: 58.4
Sample A Female 58.4
Sample B Female 69.8
Sample C Male 62.3
Sample D Male 59.2
Dorsal hippocampus
nTPM: 115.8
Samples: 4

Max nTPM: 172.5
Min nTPM: 46.3
Sample A Female 151.4
Sample B Female 93.1
Sample C Male 172.5
Sample D Male 46.3
Entorhinal cortex
nTPM: 55.2
Samples: 4

Max nTPM: 63.7
Min nTPM: 45.1
Sample A Female 45.1
Sample B Female 57.9
Sample C Male 63.7
Sample D Male 54.2
Ventral hippocampus
nTPM: 92.4
Samples: 4

Max nTPM: 111.3
Min nTPM: 53.9
Sample A Female 95.6
Sample B Female 53.9
Sample C Male 111.3
Sample D Male 108.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.0
Sample A Male 8.0
Sample B Male 7.7
Sample C Female 7.5
Sample D Female 6.0
Hippocampal formation
nTPM: 7.8
Samples: 4

Max nTPM: 9.8
Min nTPM: 5.7
Sample A Male 8.6
Sample B Male 7.2
Sample C Female 5.7
Sample D Female 9.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73712816 Antisense, RP_051206_02_D12, Mouse strain C57BL/6J (56 days, male) 0.0

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