HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.9 nTPM
HPA Brain:46.9 nTPM
GTEx:28.9 nTPM
FANTOM5:25.0 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:14.4 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048063Antibody HPA054491
Glial cells Not detectedMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.9
Sample id Sample description nTPM
Hippocampus
nTPM: 45.8
2529 Female, age 94, left hemisphere 50.3
1898 Male, age 80, left hemisphere 46.8
2148 Female, age 91, left hemisphere 46.8
2621 Female, age 67, right hemisphere 46.2
1911 Female, age 85, right hemisphere 44.9
1855 Male, age 76, left hemisphere 39.5
Dentate gyrus
nTPM: 43.3
1927 Female, age 91, both hemispheres 46.6
2530 Female, age 94, left hemisphere 45.0
2531 Female, age 67, both hemispheres 43.9
2528 Male, age 74, both hemispheres 42.8
2010 Male, age 76, both hemispheres 42.4
2246 Female, age 85, both hemispheres 39.5
Entorhinal gyrus
nTPM: 46.9
2764 Male, age 80, right hemisphere 50.8
2686 Male, age 75, right hemisphere 49.2
1787 Male, age 76, left hemisphere 48.4
1938 Female, age 85, left hemisphere 44.9
2613 Female, age 94, left hemisphere 44.2
2117 Female, age 91, right hemisphere 43.8
Hippocampus, CA1
nTPM: 44.4
2749 Male, age 80, left hemisphere 53.3
2527 Male, age 74, both hemispheres 44.7
2082 Female, age 91, right hemisphere 44.6
1873 Female, age 85, both hemispheres 43.5
2045 Male, age 76, both hemispheres 35.7
Hippocampus, CA2
nTPM: 46.3
1963 Male, age 80, left hemisphere 64.1
2113 Female, age 91, right hemisphere 45.6
1892 Male, age 76, both hemispheres 45.5
2437 Female, age 94, left hemisphere 43.9
1940 Female, age 85, left hemisphere 39.8
2249 Male, age 74, both hemispheres 38.8
Hippocampus, CA3
nTPM: 44.3
2137 Male, age 80, left hemisphere 50.0
2861 Female, age 67, both hemispheres 49.6
2620 Female, age 94, left hemisphere 46.9
1867 Male, age 76, both hemispheres 42.6
1891 Female, age 85, both hemispheres 40.1
2436 Male, age 74, both hemispheres 36.6
Parahippocampal cortex
nTPM: 43.2
2532 Female, age 72, left hemisphere 48.6
2622 Female, age 67, right hemisphere 46.3
2018 Male, age 76, both hemispheres 45.9
1990 Female, age 91, right hemisphere 44.5
2245 Female, age 91, both hemispheres 44.3
1933 Female, age 85, both hemispheres 42.8
1850 Male, age 80, both hemispheres 42.0
2692 Male, age 74, both hemispheres 41.6
2250 Female, age 67, right hemisphere 40.9
2693 Female, age 94, both hemispheres 34.7
Perirhinal gyrus
nTPM: 44.4
1847 Female, age 91, left hemisphere 48.4
1794 Male, age 80, right hemisphere 47.0
1841 Female, age 85, right hemisphere 43.7
2848 Male, age 76, right hemisphere 42.8
2521 Female, age 94, right hemisphere 40.0
Subiculum
nTPM: 44.0
2438 Female, age 94, left hemisphere 50.3
1977 Female, age 85, both hemispheres 46.4
1901 Male, age 80, both hemispheres 43.1
2619 Male, age 74, both hemispheres 42.5
2042 Male, age 76, both hemispheres 41.1
2729 Female, age 91, right hemisphere 40.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.9
Samples: 197

Max nTPM: 63.8
Min nTPM: 6.5
Std nTPM: 9.0
Median nTPM: 27.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 63.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 56.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 55.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 54.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 52.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 51.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 49.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 48.4
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 48.1
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 46.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.0
FF:10153-102I9 76 years, female 30.3
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Subiculum
nTPM: 19.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 15.1
Sample A Female 24.8
Sample B Female 18.6
Sample C Male 18.3
Sample D Male 15.1
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 22.0
Min nTPM: 18.4
Sample A Female 21.6
Sample B Female 22.0
Sample C Male 19.6
Sample D Male 18.4
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.6
Sample A Female 20.1
Sample B Female 22.9
Sample C Male 18.6
Sample D Male 19.3
Ventral hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.2
Sample A Female 18.3
Sample B Female 18.2
Sample C Male 22.9
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 15.0
Min nTPM: 13.5
Sample A Male 13.8
Sample B Male 14.6
Sample C Female 13.5
Sample D Female 15.0
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.4
Sample A Male 14.4
Sample B Male 14.0
Sample C Female 13.4
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
70300150 Antisense, RP_050602_04_G12, Mouse strain C57BL/6J (56 days, male) 5.9
69169923 Antisense, RP_050321_04_E01, Mouse strain C57BL/6J (56 days, male) 1.8

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