HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:21.3 nTPM
HPA Brain:25.8 nTPM
GTEx:21.3 nTPM
FANTOM5:59.2 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:3.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004863
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.4
2148 Female, age 91, left hemisphere 26.0
1855 Male, age 76, left hemisphere 25.7
1911 Female, age 85, right hemisphere 24.8
2529 Female, age 94, left hemisphere 24.1
1898 Male, age 80, left hemisphere 23.5
2621 Female, age 67, right hemisphere 22.6
Dentate gyrus
nTPM: 19.5
2246 Female, age 85, both hemispheres 24.7
2528 Male, age 74, both hemispheres 22.4
1927 Female, age 91, both hemispheres 18.9
2530 Female, age 94, left hemisphere 17.7
2531 Female, age 67, both hemispheres 16.7
2010 Male, age 76, both hemispheres 16.3
Entorhinal gyrus
nTPM: 24.3
2117 Female, age 91, right hemisphere 33.6
1938 Female, age 85, left hemisphere 27.1
2686 Male, age 75, right hemisphere 26.4
1787 Male, age 76, left hemisphere 20.9
2764 Male, age 80, right hemisphere 19.3
2613 Female, age 94, left hemisphere 18.7
Hippocampus, CA1
nTPM: 20.7
2082 Female, age 91, right hemisphere 27.4
2527 Male, age 74, both hemispheres 26.3
1873 Female, age 85, both hemispheres 21.7
2045 Male, age 76, both hemispheres 14.9
2749 Male, age 80, left hemisphere 13.4
Hippocampus, CA2
nTPM: 25.0
1940 Female, age 85, left hemisphere 34.4
2113 Female, age 91, right hemisphere 29.1
2249 Male, age 74, both hemispheres 29.0
2437 Female, age 94, left hemisphere 19.5
1963 Male, age 80, left hemisphere 19.3
1892 Male, age 76, both hemispheres 18.7
Hippocampus, CA3
nTPM: 23.4
2436 Male, age 74, both hemispheres 45.0
1891 Female, age 85, both hemispheres 24.1
2861 Female, age 67, both hemispheres 23.7
1867 Male, age 76, both hemispheres 18.4
2137 Male, age 80, left hemisphere 15.2
2620 Female, age 94, left hemisphere 14.2
Parahippocampal cortex
nTPM: 25.8
2692 Male, age 74, both hemispheres 36.3
2622 Female, age 67, right hemisphere 30.1
1933 Female, age 85, both hemispheres 29.7
2250 Female, age 67, right hemisphere 28.2
2245 Female, age 91, both hemispheres 25.0
1990 Female, age 91, right hemisphere 23.8
2693 Female, age 94, both hemispheres 23.0
2532 Female, age 72, left hemisphere 22.9
1850 Male, age 80, both hemispheres 20.1
2018 Male, age 76, both hemispheres 18.5
Perirhinal gyrus
nTPM: 20.5
1847 Female, age 91, left hemisphere 24.8
1841 Female, age 85, right hemisphere 22.6
1794 Male, age 80, right hemisphere 20.1
2848 Male, age 76, right hemisphere 17.5
2521 Female, age 94, right hemisphere 17.4
Subiculum
nTPM: 25.3
2619 Male, age 74, both hemispheres 33.1
2729 Female, age 91, right hemisphere 29.9
2438 Female, age 94, left hemisphere 25.5
2042 Male, age 76, both hemispheres 21.9
1977 Female, age 85, both hemispheres 21.0
1901 Male, age 80, both hemispheres 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 60.0
Min nTPM: 6.9
Std nTPM: 10.0
Median nTPM: 18.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 60.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 51.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 49.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 49.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 48.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 44.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 44.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 42.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 41.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.2
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 53.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.5
Sample A Female 10.5
Sample B Female 7.5
Sample C Male 8.0
Sample D Male 10.3
Dorsal hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.6
Sample A Female 7.9
Sample B Female 6.6
Sample C Male 8.1
Sample D Male 7.2
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 23.2
Min nTPM: 11.0
Sample A Female 15.3
Sample B Female 23.2
Sample C Male 12.5
Sample D Male 11.0
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.1
Sample A Female 6.1
Sample B Female 6.2
Sample C Male 8.0
Sample D Male 7.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.4
Sample A Male 3.5
Sample B Male 4.1
Sample C Female 3.7
Sample D Female 3.4
Hippocampal formation
nTPM: 2.0
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.4
Sample A Male 1.8
Sample B Male 1.4
Sample C Female 1.7
Sample D Female 3.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75934513 Antisense, RP_060606_01_F06, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org