HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:115.3 nTPM
HPA Brain:83.9 nTPM
GTEx:115.3 nTPM
FANTOM5:20.0 Scaled Tags Per Million
Pig:120.4 nTPM
Mouse:393.4 nTPM
Allen mouse:25.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011689
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.9
Sample id Sample description nTPM
Hippocampus
nTPM: 78.5
1898 Male, age 80, left hemisphere 91.4
1855 Male, age 76, left hemisphere 84.6
2621 Female, age 67, right hemisphere 76.7
1911 Female, age 85, right hemisphere 76.3
2529 Female, age 94, left hemisphere 74.8
2148 Female, age 91, left hemisphere 67.1
Dentate gyrus
nTPM: 78.1
2010 Male, age 76, both hemispheres 99.8
2246 Female, age 85, both hemispheres 81.1
2528 Male, age 74, both hemispheres 79.5
1927 Female, age 91, both hemispheres 76.0
2531 Female, age 67, both hemispheres 67.6
2530 Female, age 94, left hemisphere 64.7
Entorhinal gyrus
nTPM: 70.5
2117 Female, age 91, right hemisphere 81.0
1938 Female, age 85, left hemisphere 75.8
1787 Male, age 76, left hemisphere 74.4
2764 Male, age 80, right hemisphere 69.0
2686 Male, age 75, right hemisphere 61.6
2613 Female, age 94, left hemisphere 60.9
Hippocampus, CA1
nTPM: 83.3
2749 Male, age 80, left hemisphere 97.5
2045 Male, age 76, both hemispheres 91.0
1873 Female, age 85, both hemispheres 85.1
2527 Male, age 74, both hemispheres 74.0
2082 Female, age 91, right hemisphere 68.6
Hippocampus, CA2
nTPM: 76.0
1892 Male, age 76, both hemispheres 87.1
2249 Male, age 74, both hemispheres 85.0
1940 Female, age 85, left hemisphere 78.1
1963 Male, age 80, left hemisphere 74.6
2113 Female, age 91, right hemisphere 69.2
2437 Female, age 94, left hemisphere 62.0
Hippocampus, CA3
nTPM: 83.9
1867 Male, age 76, both hemispheres 112.4
2137 Male, age 80, left hemisphere 94.1
2436 Male, age 74, both hemispheres 80.7
1891 Female, age 85, both hemispheres 79.3
2620 Female, age 94, left hemisphere 73.9
2861 Female, age 67, both hemispheres 62.6
Parahippocampal cortex
nTPM: 72.8
2018 Male, age 76, both hemispheres 94.3
2250 Female, age 67, right hemisphere 85.8
1933 Female, age 85, both hemispheres 82.4
1850 Male, age 80, both hemispheres 76.9
1990 Female, age 91, right hemisphere 70.9
2245 Female, age 91, both hemispheres 69.5
2693 Female, age 94, both hemispheres 67.6
2532 Female, age 72, left hemisphere 64.6
2692 Male, age 74, both hemispheres 60.4
2622 Female, age 67, right hemisphere 55.7
Perirhinal gyrus
nTPM: 75.4
1841 Female, age 85, right hemisphere 83.8
1847 Female, age 91, left hemisphere 78.8
2521 Female, age 94, right hemisphere 76.6
1794 Male, age 80, right hemisphere 76.1
2848 Male, age 76, right hemisphere 61.6
Subiculum
nTPM: 79.2
2042 Male, age 76, both hemispheres 98.9
1901 Male, age 80, both hemispheres 85.0
1977 Female, age 85, both hemispheres 83.7
2619 Male, age 74, both hemispheres 76.6
2729 Female, age 91, right hemisphere 74.3
2438 Female, age 94, left hemisphere 56.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.3
Samples: 197

Max nTPM: 918.2
Min nTPM: 71.2
Std nTPM: 68.0
Median nTPM: 102.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 918.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 338.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 308.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 274.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 261.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 207.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 198.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 197.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 185.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 185.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 184.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.0
FF:10153-102I9 76 years, female 22.4
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 120.4
Pig sample Sample description nTPM
Subiculum
nTPM: 97.6
Samples: 4

Max nTPM: 120.7
Min nTPM: 87.6
Sample A Female 120.7
Sample B Female 92.5
Sample C Male 89.7
Sample D Male 87.6
Dorsal hippocampus
nTPM: 120.4
Samples: 4

Max nTPM: 152.9
Min nTPM: 94.6
Sample A Female 152.9
Sample B Female 123.9
Sample C Male 110.3
Sample D Male 94.6
Entorhinal cortex
nTPM: 92.2
Samples: 4

Max nTPM: 101.5
Min nTPM: 76.0
Sample A Female 101.5
Sample B Female 100.3
Sample C Male 91.0
Sample D Male 76.0
Ventral hippocampus
nTPM: 108.4
Samples: 4

Max nTPM: 122.7
Min nTPM: 82.9
Sample A Female 110.9
Sample B Female 82.9
Sample C Male 122.7
Sample D Male 117.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 393.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 329.6
Samples: 4

Max nTPM: 351.9
Min nTPM: 315.2
Sample A Male 315.2
Sample B Male 325.7
Sample C Female 351.9
Sample D Female 325.6
Hippocampal formation
nTPM: 393.5
Samples: 4

Max nTPM: 425.6
Min nTPM: 367.3
Sample A Male 425.6
Sample B Male 380.2
Sample C Female 400.7
Sample D Female 367.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.5
68924419 Antisense, RP_050303_02_C11, Mouse strain C57BL/6J (56 days, male) 25.5

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