HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:59.4 nTPM
HPA Brain:61.9 nTPM
GTEx:59.4 nTPM
FANTOM5:24.5 Scaled Tags Per Million
Mouse:37.5 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.9
Sample id Sample description nTPM
Hippocampus
nTPM: 49.0
1911 Female, age 85, right hemisphere 56.8
1898 Male, age 80, left hemisphere 52.3
1855 Male, age 76, left hemisphere 49.4
2621 Female, age 67, right hemisphere 48.0
2529 Female, age 94, left hemisphere 44.3
2148 Female, age 91, left hemisphere 42.9
Dentate gyrus
nTPM: 52.3
2530 Female, age 94, left hemisphere 78.8
2528 Male, age 74, both hemispheres 58.7
2010 Male, age 76, both hemispheres 53.7
2246 Female, age 85, both hemispheres 43.9
2531 Female, age 67, both hemispheres 43.0
1927 Female, age 91, both hemispheres 35.5
Entorhinal gyrus
nTPM: 56.3
2117 Female, age 91, right hemisphere 77.0
2764 Male, age 80, right hemisphere 65.8
2613 Female, age 94, left hemisphere 59.7
1787 Male, age 76, left hemisphere 51.3
1938 Female, age 85, left hemisphere 43.9
2686 Male, age 75, right hemisphere 40.3
Hippocampus, CA1
nTPM: 39.7
1873 Female, age 85, both hemispheres 48.3
2527 Male, age 74, both hemispheres 42.3
2082 Female, age 91, right hemisphere 38.6
2749 Male, age 80, left hemisphere 38.4
2045 Male, age 76, both hemispheres 30.7
Hippocampus, CA2
nTPM: 50.5
1963 Male, age 80, left hemisphere 66.8
2249 Male, age 74, both hemispheres 53.6
2437 Female, age 94, left hemisphere 51.4
1940 Female, age 85, left hemisphere 49.5
2113 Female, age 91, right hemisphere 41.5
1892 Male, age 76, both hemispheres 40.3
Hippocampus, CA3
nTPM: 41.3
1891 Female, age 85, both hemispheres 61.0
1867 Male, age 76, both hemispheres 44.1
2620 Female, age 94, left hemisphere 37.7
2861 Female, age 67, both hemispheres 37.4
2436 Male, age 74, both hemispheres 36.5
2137 Male, age 80, left hemisphere 30.9
Parahippocampal cortex
nTPM: 43.4
2692 Male, age 74, both hemispheres 59.9
2532 Female, age 72, left hemisphere 53.9
1990 Female, age 91, right hemisphere 51.5
2018 Male, age 76, both hemispheres 43.4
1850 Male, age 80, both hemispheres 43.3
1933 Female, age 85, both hemispheres 41.4
2245 Female, age 91, both hemispheres 40.2
2693 Female, age 94, both hemispheres 37.9
2622 Female, age 67, right hemisphere 33.1
2250 Female, age 67, right hemisphere 28.9
Perirhinal gyrus
nTPM: 33.9
1794 Male, age 80, right hemisphere 36.9
2848 Male, age 76, right hemisphere 36.1
2521 Female, age 94, right hemisphere 34.3
1847 Female, age 91, left hemisphere 32.2
1841 Female, age 85, right hemisphere 30.1
Subiculum
nTPM: 61.9
2042 Male, age 76, both hemispheres 85.3
1901 Male, age 80, both hemispheres 74.4
1977 Female, age 85, both hemispheres 60.0
2619 Male, age 74, both hemispheres 54.9
2729 Female, age 91, right hemisphere 48.9
2438 Female, age 94, left hemisphere 47.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.4
Samples: 197

Max nTPM: 247.3
Min nTPM: 11.3
Std nTPM: 30.1
Median nTPM: 53.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 247.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 169.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 155.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 148.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 133.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 128.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 127.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 112.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 112.5
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 110.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 110.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.5
FF:10153-102I9 76 years, female 29.3
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 41.2
Min nTPM: 33.2
Sample A Male 41.2
Sample B Male 35.3
Sample C Female 33.2
Sample D Female 35.5
Hippocampal formation
nTPM: 37.5
Samples: 4

Max nTPM: 43.5
Min nTPM: 32.1
Sample A Male 32.1
Sample B Male 37.7
Sample C Female 43.5
Sample D Female 36.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
248335 Antisense, RP_040526_01_A03, Mouse strain C57BL/6J (56 days, male) 2.8
77620369 Antisense, RP_070205_01_D04, Mouse strain C57BL/6J (56 days, male) 1.7

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