HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:27.8 nTPM
HPA Brain:40.7 nTPM
GTEx:27.8 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:14.5 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010844
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.7
Sample id Sample description nTPM
Hippocampus
nTPM: 39.3
2529 Female, age 94, left hemisphere 47.4
1855 Male, age 76, left hemisphere 41.8
1911 Female, age 85, right hemisphere 40.1
1898 Male, age 80, left hemisphere 38.1
2148 Female, age 91, left hemisphere 36.2
2621 Female, age 67, right hemisphere 31.9
Dentate gyrus
nTPM: 37.4
2010 Male, age 76, both hemispheres 52.8
2528 Male, age 74, both hemispheres 44.1
2530 Female, age 94, left hemisphere 38.4
2246 Female, age 85, both hemispheres 32.8
2531 Female, age 67, both hemispheres 28.3
1927 Female, age 91, both hemispheres 27.7
Entorhinal gyrus
nTPM: 31.4
2117 Female, age 91, right hemisphere 43.4
1787 Male, age 76, left hemisphere 37.5
1938 Female, age 85, left hemisphere 30.5
2613 Female, age 94, left hemisphere 27.6
2764 Male, age 80, right hemisphere 25.6
2686 Male, age 75, right hemisphere 24.0
Hippocampus, CA1
nTPM: 40.3
2527 Male, age 74, both hemispheres 43.1
2082 Female, age 91, right hemisphere 42.6
2045 Male, age 76, both hemispheres 41.8
1873 Female, age 85, both hemispheres 39.0
2749 Male, age 80, left hemisphere 35.2
Hippocampus, CA2
nTPM: 37.7
2113 Female, age 91, right hemisphere 43.9
2249 Male, age 74, both hemispheres 41.8
1940 Female, age 85, left hemisphere 40.3
2437 Female, age 94, left hemisphere 39.7
1963 Male, age 80, left hemisphere 32.8
1892 Male, age 76, both hemispheres 27.7
Hippocampus, CA3
nTPM: 40.0
2436 Male, age 74, both hemispheres 65.0
1867 Male, age 76, both hemispheres 40.2
1891 Female, age 85, both hemispheres 37.3
2861 Female, age 67, both hemispheres 35.3
2137 Male, age 80, left hemisphere 31.6
2620 Female, age 94, left hemisphere 30.8
Parahippocampal cortex
nTPM: 29.4
2018 Male, age 76, both hemispheres 40.8
2692 Male, age 74, both hemispheres 37.9
1990 Female, age 91, right hemisphere 33.7
2250 Female, age 67, right hemisphere 31.6
2245 Female, age 91, both hemispheres 28.9
1933 Female, age 85, both hemispheres 28.7
2622 Female, age 67, right hemisphere 27.2
2532 Female, age 72, left hemisphere 24.4
1850 Male, age 80, both hemispheres 24.2
2693 Female, age 94, both hemispheres 16.9
Perirhinal gyrus
nTPM: 24.3
1847 Female, age 91, left hemisphere 34.2
2521 Female, age 94, right hemisphere 24.2
1794 Male, age 80, right hemisphere 21.1
1841 Female, age 85, right hemisphere 21.0
2848 Male, age 76, right hemisphere 21.0
Subiculum
nTPM: 40.7
2729 Female, age 91, right hemisphere 50.5
2619 Male, age 74, both hemispheres 47.0
2042 Male, age 76, both hemispheres 45.2
2438 Female, age 94, left hemisphere 37.6
1901 Male, age 80, both hemispheres 32.1
1977 Female, age 85, both hemispheres 31.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 82.9
Min nTPM: 10.3
Std nTPM: 10.3
Median nTPM: 25.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 82.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 63.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 57.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 55.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 54.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 49.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 48.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 47.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 46.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 46.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 46.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.2
FF:10153-102I9 76 years, female 41.4
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.3
Pig sample Sample description nTPM
Subiculum
nTPM: 22.8
Samples: 4

Max nTPM: 26.6
Min nTPM: 19.4
Sample A Female 26.6
Sample B Female 19.4
Sample C Male 22.1
Sample D Male 23.2
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.1
Min nTPM: 14.0
Sample A Female 20.9
Sample B Female 14.0
Sample C Male 21.1
Sample D Male 16.6
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 30.3
Min nTPM: 20.5
Sample A Female 30.3
Sample B Female 28.3
Sample C Male 26.1
Sample D Male 20.5
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 27.6
Min nTPM: 15.5
Sample A Female 19.1
Sample B Female 15.5
Sample C Male 27.6
Sample D Male 17.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.1
Sample A Male 16.1
Sample B Male 12.1
Sample C Female 14.3
Sample D Female 15.5
Hippocampal formation
nTPM: 13.7
Samples: 4

Max nTPM: 14.8
Min nTPM: 12.8
Sample A Male 14.8
Sample B Male 13.8
Sample C Female 13.3
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
100142543 Antisense, RP_110421_01_A03, Mouse strain C57BL/6J (56 days, male) 0.8
112650553 Antisense, RP_110421_01_A03, Mouse strain C57BL/6J (56 days, male) 0.4

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