HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:65.8 nTPM
HPA Brain:146.6 nTPM
GTEx:65.8 nTPM
FANTOM5:125.5 Scaled Tags Per Million
Pig:125.4 nTPM
Mouse:81.4 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017087Antibody CAB025786
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 146.6
Sample id Sample description nTPM
Hippocampus
nTPM: 140.7
1855 Male, age 76, left hemisphere 156.5
2148 Female, age 91, left hemisphere 154.9
2529 Female, age 94, left hemisphere 150.7
2621 Female, age 67, right hemisphere 132.7
1898 Male, age 80, left hemisphere 132.2
1911 Female, age 85, right hemisphere 117.0
Dentate gyrus
nTPM: 118.8
2530 Female, age 94, left hemisphere 132.4
2246 Female, age 85, both hemispheres 126.8
2528 Male, age 74, both hemispheres 118.3
2531 Female, age 67, both hemispheres 115.2
2010 Male, age 76, both hemispheres 114.7
1927 Female, age 91, both hemispheres 105.6
Entorhinal gyrus
nTPM: 146.6
2117 Female, age 91, right hemisphere 161.0
2686 Male, age 75, right hemisphere 160.7
2613 Female, age 94, left hemisphere 159.4
1787 Male, age 76, left hemisphere 142.6
1938 Female, age 85, left hemisphere 133.3
2764 Male, age 80, right hemisphere 123.0
Hippocampus, CA1
nTPM: 119.0
2527 Male, age 74, both hemispheres 132.5
2749 Male, age 80, left hemisphere 117.8
2045 Male, age 76, both hemispheres 115.5
2082 Female, age 91, right hemisphere 115.5
1873 Female, age 85, both hemispheres 113.8
Hippocampus, CA2
nTPM: 115.1
2437 Female, age 94, left hemisphere 136.9
1892 Male, age 76, both hemispheres 125.6
2113 Female, age 91, right hemisphere 117.7
1963 Male, age 80, left hemisphere 114.5
1940 Female, age 85, left hemisphere 98.3
2249 Male, age 74, both hemispheres 97.4
Hippocampus, CA3
nTPM: 124.4
2861 Female, age 67, both hemispheres 189.8
1867 Male, age 76, both hemispheres 124.6
2620 Female, age 94, left hemisphere 117.8
2137 Male, age 80, left hemisphere 116.0
1891 Female, age 85, both hemispheres 107.2
2436 Male, age 74, both hemispheres 90.9
Parahippocampal cortex
nTPM: 120.5
2692 Male, age 74, both hemispheres 145.4
2622 Female, age 67, right hemisphere 133.2
2018 Male, age 76, both hemispheres 127.7
1933 Female, age 85, both hemispheres 123.8
2250 Female, age 67, right hemisphere 123.8
2245 Female, age 91, both hemispheres 121.6
2693 Female, age 94, both hemispheres 117.3
1990 Female, age 91, right hemisphere 105.7
1850 Male, age 80, both hemispheres 103.3
2532 Female, age 72, left hemisphere 103.0
Perirhinal gyrus
nTPM: 114.3
2521 Female, age 94, right hemisphere 143.8
1847 Female, age 91, left hemisphere 130.9
1794 Male, age 80, right hemisphere 104.7
1841 Female, age 85, right hemisphere 96.2
2848 Male, age 76, right hemisphere 95.8
Subiculum
nTPM: 128.0
2438 Female, age 94, left hemisphere 144.3
2729 Female, age 91, right hemisphere 139.5
2619 Male, age 74, both hemispheres 124.9
1977 Female, age 85, both hemispheres 121.8
1901 Male, age 80, both hemispheres 120.4
2042 Male, age 76, both hemispheres 116.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.8
Samples: 197

Max nTPM: 134.3
Min nTPM: 23.9
Std nTPM: 19.7
Median nTPM: 64.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 134.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 122.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 120.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 120.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 111.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 109.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 109.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 104.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 103.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 102.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 101.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.5
FF:10153-102I9 76 years, female 141.0
FF:10169-103B7 60 years, female 110.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 125.4
Pig sample Sample description nTPM
Subiculum
nTPM: 107.2
Samples: 4

Max nTPM: 140.9
Min nTPM: 89.4
Sample A Female 140.9
Sample B Female 97.4
Sample C Male 101.0
Sample D Male 89.4
Dorsal hippocampus
nTPM: 68.3
Samples: 4

Max nTPM: 78.6
Min nTPM: 52.1
Sample A Female 76.4
Sample B Female 78.6
Sample C Male 66.1
Sample D Male 52.1
Entorhinal cortex
nTPM: 125.4
Samples: 4

Max nTPM: 151.5
Min nTPM: 94.7
Sample A Female 143.2
Sample B Female 94.7
Sample C Male 151.5
Sample D Male 112.3
Ventral hippocampus
nTPM: 88.7
Samples: 4

Max nTPM: 127.7
Min nTPM: 66.8
Sample A Female 85.1
Sample B Female 66.8
Sample C Male 127.7
Sample D Male 75.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.4
Samples: 4

Max nTPM: 106.8
Min nTPM: 72.7
Sample A Male 73.4
Sample B Male 72.7
Sample C Female 72.7
Sample D Female 106.8
Hippocampal formation
nTPM: 61.5
Samples: 4

Max nTPM: 63.0
Min nTPM: 59.5
Sample A Male 59.5
Sample B Male 63.0
Sample C Female 61.1
Sample D Female 62.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
68845287 Antisense, RP_050224_01_E03, Mouse strain C57BL/6J (56 days, male) 12.3
71358662 Antisense, RP_050725_03_F12, Mouse strain C57BL/6J (56 days, male) 10.5

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