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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
242.4
nTPM
FANTOM5:
785.8
Scaled Tags Per Million
Pig:
228.7
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
242.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 177.8
2301
Female, age 85, both hemispheres
253.3
2188
Female, age 91, both hemispheres
212.1
1984
Male, age 76, both hemispheres
138.2
2090
Male, age 80, both hemispheres
107.6
Dorsal cochlear nucleus nTPM: 179.5
2187
Female, age 91, both hemispheres
223.2
2802
Male, age 74, right hemisphere
191.0
2370
Male, age 61, both hemispheres
182.1
2058
Male, age 76, both hemispheres
160.9
2378
Male, age 80, both hemispheres
140.2
Dorsal tegmental nucleus nTPM: 185.8
2326
Male, age 74, both hemispheres
218.4
2083
Male, age 80, both hemispheres
205.5
2358
Male, age 61, both hemispheres
162.8
1936
Male, age 76, left hemisphere
156.5
Dorsolateral tegmental area nTPM: 164.9
2141
Male, age 76, both hemispheres
189.6
2654
Male, age 80, both hemispheres
182.1
2751
Female, age 85, both hemispheres
164.8
2337
Male, age 61, both hemispheres
144.5
2360
Male, age 74, both hemispheres
143.3
Kolliker-Fuse nucleus nTPM: 204.1
2793
Female, age 91, left hemisphere
269.0
2163
Male, age 80, both hemispheres
220.8
2315
Male, age 76, right hemisphere
122.4
Lateral lemniscal nuclei nTPM: 189.6
2320
Female, age 91, left hemisphere
266.7
2453
Male, age 74, right hemisphere
198.9
2169
Male, age 76, both hemispheres
167.6
2746
Female, age 85, left hemisphere
166.6
2036
Male, age 80, both hemispheres
148.1
Lateral parabrachial nucleus nTPM: 152.1
2790
Male, age 61, both hemispheres
157.5
2139
Female, age 85, right hemisphere
153.7
2013
Male, age 80, both hemispheres
149.6
2792
Male, age 76, both hemispheres
147.5
Lateral vestibular nucleus nTPM: 203.5
2184
Male, age 76, both hemispheres
211.0
2311
Male, age 80, both hemispheres
196.0
Locus coeruleus nTPM: 198.0
2162
Male, age 80, both hemispheres
243.0
1980
Male, age 76, both hemispheres
241.8
2720
Male, age 74, both hemispheres
200.2
2317
Female, age 72, unknown
195.3
2123
Female, age 91, both hemispheres
184.9
2788
Male, age 74, unknown
174.1
2014
Male, age 55, unknown
146.8
Medial parabrachial nucleus nTPM: 184.9
2170
Female, age 91, both hemispheres
238.0
2156
Male, age 61, both hemispheres
206.5
2786
Male, age 76, both hemispheres
203.8
2854
Male, age 80, both hemispheres
146.6
2463
Female, age 85, right hemisphere
129.5
Medial periolivary nuclei nTPM: 160.4
2458
Female, age 91, both hemispheres
225.6
2171
Female, age 85, both hemispheres
155.0
2791
Male, age 74, right hemisphere
147.3
2063
Male, age 76, both hemispheres
143.9
2081
Male, age 80, both hemispheres
130.0
Motor facial nucleus nTPM: 174.6
2327
Male, age 80, both hemispheres
191.4
2365
Male, age 74, right hemisphere
189.6
2697
Female, age 85, both hemispheres
186.1
2126
Male, age 61, both hemispheres
166.6
2795
Female, age 91, both hemispheres
164.0
2062
Male, age 76, both hemispheres
150.0
Motor trigeminal nucleus nTPM: 195.5
2321
Female, age 91, both hemispheres
257.5
2309
Male, age 76, both hemispheres
196.0
2335
Male, age 61, both hemispheres
191.5
2560
Male, age 74, both hemispheres
191.1
2079
Male, age 80, both hemispheres
141.3
Nuclei of the trapezoid body nTPM: 171.9
2368
Female, age 91, both hemispheres
199.4
2159
Male, age 61, both hemispheres
179.7
1983
Male, age 76, both hemispheres
172.2
2735
Female, age 85, both hemispheres
155.0
2166
Male, age 80, both hemispheres
153.2
Nucleus raphe magnus nTPM: 183.2
2459
Female, age 91, both hemispheres
246.0
2455
Male, age 74, both hemispheres
195.9
2328
Male, age 80, both hemispheres
191.4
2172
Female, age 85, both hemispheres
167.3
2051
Male, age 76, both hemispheres
154.4
2160
Male, age 61, both hemispheres
144.2
Paramedian reticular nucleus nTPM: 153.6
2313
Male, age 61, both hemispheres
194.7
2057
Male, age 80, both hemispheres
145.8
2052
Male, age 76, both hemispheres
139.2
2050
Female, age 85, both hemispheres
134.5
Pedunculopontine tegmental nucleus nTPM: 190.6
2334
Male, age 80, both hemispheres
224.7
1921
Female, age 85, both hemispheres
190.1
2338
Male, age 61, both hemispheres
157.0
Pontine nuclei nTPM: 182.2
2454
Male, age 74, left hemisphere
265.0
2319
Female, age 91, both hemispheres
256.3
1968
Male, age 76, left hemisphere
172.4
2115
Male, age 80, left hemisphere
169.6
2787
Female, age 85, both hemispheres
164.0
2109
Female, age 72, unknown
153.9
2727
Male, age 61, right hemisphere
140.8
1863
Male, age 55, unknown
135.3
Pontine raphe nucleus nTPM: 187.4
2853
Male, age 76, midline
223.1
2122
Female, age 85, midline
151.7
Posteroventral cochlear nucleus nTPM: 188.9
2135
Female, age 91, both hemispheres
237.1
2070
Male, age 76, both hemispheres
201.1
2752
Female, age 85, both hemispheres
198.4
2371
Male, age 61, both hemispheres
187.1
2341
Male, age 80, both hemispheres
120.9
Principal sensory trigeminal nucleus nTPM: 191.9
2367
Female, age 91, left hemisphere
250.8
2324
Male, age 76, both hemispheres
245.6
2158
Male, age 61, both hemispheres
154.6
2008
Male, age 80, left hemisphere
116.6
Reticular pontine nucleus, caudal nTPM: 203.4
2457
Female, age 91, both hemispheres
253.2
2559
Male, age 74, both hemispheres
213.0
2332
Male, age 80, right hemisphere
195.8
2092
Male, age 76, both hemispheres
151.5
Reticular pontine nucleus, oral nTPM: 198.4
2366
Female, age 91, both hemispheres
282.0
2361
Male, age 74, both hemispheres
196.1
2167
Male, age 76, both hemispheres
191.8
1939
Male, age 80, both hemispheres
172.7
2012
Female, age 85, both hemispheres
149.2
Reticulotegmental nucleus nTPM: 225.4
2452
Male, age 74, both hemispheres
260.2
2322
Female, age 91, both hemispheres
255.4
2325
Male, age 76, both hemispheres
204.7
2333
Male, age 80, both hemispheres
181.3
Spinal trigeminal nucleus, oral nTPM: 242.4
1978
Male, age 76, both hemispheres
324.8
2737
Female, age 85, both hemispheres
203.0
2164
Male, age 80, both hemispheres
199.3
Subcoeruleus area nTPM: 202.7
2323
Female, age 91, left hemisphere
283.2
2451
Male, age 74, both hemispheres
256.9
1958
Male, age 80, both hemispheres
171.0
2369
Female, age 85, left hemisphere
161.7
2089
Male, age 76, left hemisphere
140.9
Superior olive nTPM: 177.9
2561
Female, age 91, both hemispheres
209.2
2329
Male, age 80, right hemisphere
199.3
2364
Male, age 74, right hemisphere
189.2
2020
Male, age 76, both hemispheres
149.0
1875
Female, age 85, both hemispheres
142.6
Ventral periolivary nuclei nTPM: 155.7
2794
Female, age 91, left hemisphere
171.2
2165
Male, age 80, both hemispheres
157.7
2023
Male, age 76, both hemispheres
157.6
2130
Female, age 85, both hemispheres
136.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 173.1
2456
Female, age 91, both hemispheres
217.4
2449
Male, age 74, both hemispheres
198.1
2359
Male, age 61, both hemispheres
167.5
2161
Male, age 80, both hemispheres
158.1
2840
Female, age 85, both hemispheres
154.7
1959
Male, age 76, both hemispheres
142.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
