HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:22.7 nTPM
HPA Brain:25.6 nTPM
GTEx:22.7 nTPM
FANTOM5:59.1 Scaled Tags Per Million
Pig:52.3 nTPM
Mouse:39.5 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054846Antibody CAB021982
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.6
Sample id Sample description nTPM
Hippocampus
nTPM: 22.5
1898 Male, age 80, left hemisphere 27.1
1855 Male, age 76, left hemisphere 24.3
1911 Female, age 85, right hemisphere 23.6
2621 Female, age 67, right hemisphere 22.5
2529 Female, age 94, left hemisphere 19.3
2148 Female, age 91, left hemisphere 18.0
Dentate gyrus
nTPM: 22.7
2530 Female, age 94, left hemisphere 32.7
2528 Male, age 74, both hemispheres 26.3
2010 Male, age 76, both hemispheres 25.6
2246 Female, age 85, both hemispheres 19.4
1927 Female, age 91, both hemispheres 17.4
2531 Female, age 67, both hemispheres 15.0
Entorhinal gyrus
nTPM: 21.3
2117 Female, age 91, right hemisphere 29.2
1787 Male, age 76, left hemisphere 23.5
1938 Female, age 85, left hemisphere 23.4
2764 Male, age 80, right hemisphere 22.7
2613 Female, age 94, left hemisphere 18.1
2686 Male, age 75, right hemisphere 11.1
Hippocampus, CA1
nTPM: 21.4
2527 Male, age 74, both hemispheres 26.7
2749 Male, age 80, left hemisphere 21.9
1873 Female, age 85, both hemispheres 21.8
2045 Male, age 76, both hemispheres 19.0
2082 Female, age 91, right hemisphere 17.6
Hippocampus, CA2
nTPM: 25.6
2249 Male, age 74, both hemispheres 33.6
2437 Female, age 94, left hemisphere 26.9
1892 Male, age 76, both hemispheres 25.0
1963 Male, age 80, left hemisphere 24.9
1940 Female, age 85, left hemisphere 23.1
2113 Female, age 91, right hemisphere 19.8
Hippocampus, CA3
nTPM: 19.6
2436 Male, age 74, both hemispheres 30.2
1891 Female, age 85, both hemispheres 25.7
1867 Male, age 76, both hemispheres 23.6
2137 Male, age 80, left hemisphere 15.7
2861 Female, age 67, both hemispheres 13.8
2620 Female, age 94, left hemisphere 8.5
Parahippocampal cortex
nTPM: 19.9
2532 Female, age 72, left hemisphere 22.7
1933 Female, age 85, both hemispheres 22.4
1850 Male, age 80, both hemispheres 22.3
2250 Female, age 67, right hemisphere 21.9
1990 Female, age 91, right hemisphere 21.4
2018 Male, age 76, both hemispheres 20.0
2245 Female, age 91, both hemispheres 19.1
2693 Female, age 94, both hemispheres 18.3
2692 Male, age 74, both hemispheres 18.0
2622 Female, age 67, right hemisphere 13.5
Perirhinal gyrus
nTPM: 22.1
2521 Female, age 94, right hemisphere 23.8
1794 Male, age 80, right hemisphere 23.1
1841 Female, age 85, right hemisphere 22.5
1847 Female, age 91, left hemisphere 22.1
2848 Male, age 76, right hemisphere 18.8
Subiculum
nTPM: 23.8
1901 Male, age 80, both hemispheres 26.7
2438 Female, age 94, left hemisphere 26.1
2042 Male, age 76, both hemispheres 25.9
1977 Female, age 85, both hemispheres 23.6
2619 Male, age 74, both hemispheres 20.8
2729 Female, age 91, right hemisphere 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.7
Samples: 197

Max nTPM: 39.8
Min nTPM: 12.3
Std nTPM: 5.6
Median nTPM: 21.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 39.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 39.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 37.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 36.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 36.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 35.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 35.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 35.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 35.0
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 34.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 33.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.1
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 51.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.3
Pig sample Sample description nTPM
Subiculum
nTPM: 45.8
Samples: 4

Max nTPM: 56.4
Min nTPM: 41.4
Sample A Female 56.4
Sample B Female 41.4
Sample C Male 42.9
Sample D Male 42.5
Dorsal hippocampus
nTPM: 52.3
Samples: 4

Max nTPM: 65.3
Min nTPM: 39.9
Sample A Female 65.3
Sample B Female 49.0
Sample C Male 54.9
Sample D Male 39.9
Entorhinal cortex
nTPM: 44.3
Samples: 4

Max nTPM: 55.5
Min nTPM: 36.5
Sample A Female 55.5
Sample B Female 42.4
Sample C Male 42.7
Sample D Male 36.5
Ventral hippocampus
nTPM: 49.9
Samples: 4

Max nTPM: 61.0
Min nTPM: 35.7
Sample A Female 53.2
Sample B Female 35.7
Sample C Male 61.0
Sample D Male 49.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 41.5
Min nTPM: 36.6
Sample A Male 40.3
Sample B Male 36.6
Sample C Female 39.0
Sample D Female 41.5
Hippocampal formation
nTPM: 39.5
Samples: 4

Max nTPM: 40.7
Min nTPM: 38.4
Sample A Male 39.0
Sample B Male 38.4
Sample C Female 39.9
Sample D Female 40.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
638705 Antisense, RP_040831_02_C02, Mouse strain C57BL/6J (56 days, male) 1.2

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