HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:31.2 nTPM
GTEx:24.9 nTPM
FANTOM5:45.8 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:20.0 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063708Antibody HPA064435Antibody CAB010297
Glial cells Not detectedNot detectedMedium
Neuronal cells LowMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.2
2529 Female, age 94, left hemisphere 34.1
2148 Female, age 91, left hemisphere 30.6
2621 Female, age 67, right hemisphere 30.3
1911 Female, age 85, right hemisphere 30.0
1898 Male, age 80, left hemisphere 29.1
1855 Male, age 76, left hemisphere 27.2
Dentate gyrus
nTPM: 28.4
2530 Female, age 94, left hemisphere 33.0
2010 Male, age 76, both hemispheres 32.5
2528 Male, age 74, both hemispheres 31.1
2246 Female, age 85, both hemispheres 25.5
2531 Female, age 67, both hemispheres 25.0
1927 Female, age 91, both hemispheres 23.4
Entorhinal gyrus
nTPM: 29.6
2117 Female, age 91, right hemisphere 37.5
2686 Male, age 75, right hemisphere 30.8
1787 Male, age 76, left hemisphere 30.3
2613 Female, age 94, left hemisphere 27.1
1938 Female, age 85, left hemisphere 26.0
2764 Male, age 80, right hemisphere 26.0
Hippocampus, CA1
nTPM: 27.5
2527 Male, age 74, both hemispheres 30.0
2749 Male, age 80, left hemisphere 28.0
1873 Female, age 85, both hemispheres 27.4
2045 Male, age 76, both hemispheres 26.3
2082 Female, age 91, right hemisphere 25.9
Hippocampus, CA2
nTPM: 27.8
2249 Male, age 74, both hemispheres 32.2
1963 Male, age 80, left hemisphere 29.6
1940 Female, age 85, left hemisphere 28.6
2113 Female, age 91, right hemisphere 27.7
2437 Female, age 94, left hemisphere 25.7
1892 Male, age 76, both hemispheres 23.0
Hippocampus, CA3
nTPM: 30.1
2436 Male, age 74, both hemispheres 32.8
2861 Female, age 67, both hemispheres 31.3
2137 Male, age 80, left hemisphere 30.0
1867 Male, age 76, both hemispheres 29.7
1891 Female, age 85, both hemispheres 29.1
2620 Female, age 94, left hemisphere 27.4
Parahippocampal cortex
nTPM: 24.4
2692 Male, age 74, both hemispheres 29.6
2018 Male, age 76, both hemispheres 29.0
2622 Female, age 67, right hemisphere 26.0
1990 Female, age 91, right hemisphere 24.8
1933 Female, age 85, both hemispheres 24.3
2250 Female, age 67, right hemisphere 24.3
2245 Female, age 91, both hemispheres 23.6
2532 Female, age 72, left hemisphere 22.7
1850 Male, age 80, both hemispheres 21.1
2693 Female, age 94, both hemispheres 18.7
Perirhinal gyrus
nTPM: 19.1
2848 Male, age 76, right hemisphere 21.6
1847 Female, age 91, left hemisphere 20.2
2521 Female, age 94, right hemisphere 18.8
1794 Male, age 80, right hemisphere 17.7
1841 Female, age 85, right hemisphere 17.2
Subiculum
nTPM: 31.2
2042 Male, age 76, both hemispheres 36.2
2729 Female, age 91, right hemisphere 33.4
2619 Male, age 74, both hemispheres 32.1
1901 Male, age 80, both hemispheres 31.5
1977 Female, age 85, both hemispheres 27.3
2438 Female, age 94, left hemisphere 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 74.3
Min nTPM: 11.6
Std nTPM: 9.5
Median nTPM: 22.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 74.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 73.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 66.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 56.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 53.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 49.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 47.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 44.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 43.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 39.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.8
FF:10153-102I9 76 years, female 55.3
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.9
Pig sample Sample description nTPM
Subiculum
nTPM: 11.6
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.9
Sample A Female 14.8
Sample B Female 9.9
Sample C Male 11.0
Sample D Male 10.8
Dorsal hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.9
Sample A Female 10.7
Sample B Female 9.9
Sample C Male 13.0
Sample D Male 10.4
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 13.0
Min nTPM: 10.0
Sample A Female 13.0
Sample B Female 11.7
Sample C Male 12.8
Sample D Male 10.0
Ventral hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 12.4
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 9.2
Sample C Male 12.4
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 21.6
Min nTPM: 19.2
Sample A Male 19.2
Sample B Male 19.4
Sample C Female 19.9
Sample D Female 21.6
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 21.5
Min nTPM: 19.2
Sample A Male 19.5
Sample B Male 21.5
Sample C Female 19.2
Sample D Female 19.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
68844038 Antisense, RP_050217_02_G07, Mouse strain C57BL/6J (56 days, male) 5.0

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