HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:4.9 nTPM
HPA Brain:21.4 nTPM
GTEx:4.9 nTPM
FANTOM5:4.0 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:5.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040518
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 18.0
2621 Female, age 67, right hemisphere 20.2
1855 Male, age 76, left hemisphere 20.1
2529 Female, age 94, left hemisphere 19.0
1898 Male, age 80, left hemisphere 17.8
2148 Female, age 91, left hemisphere 16.3
1911 Female, age 85, right hemisphere 14.5
Dentate gyrus
nTPM: 18.1
2531 Female, age 67, both hemispheres 22.3
2530 Female, age 94, left hemisphere 21.1
2010 Male, age 76, both hemispheres 18.5
1927 Female, age 91, both hemispheres 17.3
2246 Female, age 85, both hemispheres 15.0
2528 Male, age 74, both hemispheres 14.5
Entorhinal gyrus
nTPM: 18.6
1787 Male, age 76, left hemisphere 22.3
2764 Male, age 80, right hemisphere 20.1
2686 Male, age 75, right hemisphere 19.5
2613 Female, age 94, left hemisphere 19.1
1938 Female, age 85, left hemisphere 17.6
2117 Female, age 91, right hemisphere 12.9
Hippocampus, CA1
nTPM: 18.1
2045 Male, age 76, both hemispheres 21.4
2749 Male, age 80, left hemisphere 19.2
2082 Female, age 91, right hemisphere 17.4
1873 Female, age 85, both hemispheres 16.3
2527 Male, age 74, both hemispheres 16.2
Hippocampus, CA2
nTPM: 17.3
2437 Female, age 94, left hemisphere 22.6
1892 Male, age 76, both hemispheres 19.7
1963 Male, age 80, left hemisphere 17.9
2249 Male, age 74, both hemispheres 15.5
1940 Female, age 85, left hemisphere 14.0
2113 Female, age 91, right hemisphere 14.0
Hippocampus, CA3
nTPM: 16.9
2861 Female, age 67, both hemispheres 24.5
1867 Male, age 76, both hemispheres 17.7
2620 Female, age 94, left hemisphere 16.3
2137 Male, age 80, left hemisphere 16.0
2436 Male, age 74, both hemispheres 14.4
1891 Female, age 85, both hemispheres 12.7
Parahippocampal cortex
nTPM: 19.2
2532 Female, age 72, left hemisphere 24.0
1850 Male, age 80, both hemispheres 21.5
2622 Female, age 67, right hemisphere 20.3
1990 Female, age 91, right hemisphere 19.1
1933 Female, age 85, both hemispheres 18.9
2018 Male, age 76, both hemispheres 18.8
2250 Female, age 67, right hemisphere 18.4
2245 Female, age 91, both hemispheres 18.2
2693 Female, age 94, both hemispheres 17.8
2692 Male, age 74, both hemispheres 15.3
Perirhinal gyrus
nTPM: 21.4
1794 Male, age 80, right hemisphere 23.4
2848 Male, age 76, right hemisphere 22.9
1841 Female, age 85, right hemisphere 22.3
1847 Female, age 91, left hemisphere 22.3
2521 Female, age 94, right hemisphere 15.9
Subiculum
nTPM: 16.5
2438 Female, age 94, left hemisphere 20.8
1977 Female, age 85, both hemispheres 18.9
2619 Male, age 74, both hemispheres 18.1
1901 Male, age 80, both hemispheres 14.3
2729 Female, age 91, right hemisphere 14.0
2042 Male, age 76, both hemispheres 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.9
Samples: 197

Max nTPM: 11.3
Min nTPM: 1.3
Std nTPM: 1.7
Median nTPM: 4.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 11.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 10.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 9.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 9.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 9.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 8.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 8.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 8.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 8.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 8.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 8.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.0
FF:10169-103B7 60 years, female 4.1
FF:10153-102I9 76 years, female 3.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 13.2
Min nTPM: 9.5
Sample A Female 13.2
Sample B Female 9.8
Sample C Male 10.1
Sample D Male 9.5
Dorsal hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.9
Sample A Female 11.7
Sample B Female 12.9
Sample C Male 8.9
Sample D Male 11.7
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.1
Min nTPM: 12.3
Sample A Female 14.2
Sample B Female 15.1
Sample C Male 13.9
Sample D Male 12.3
Ventral hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.4
Sample A Female 11.4
Sample B Female 9.4
Sample C Male 12.1
Sample D Male 11.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.2
Min nTPM: 3.2
Sample A Male 3.2
Sample B Male 6.2
Sample C Female 6.1
Sample D Female 4.4
Hippocampal formation
nTPM: 4.6
Samples: 4

Max nTPM: 6.0
Min nTPM: 3.5
Sample A Male 3.5
Sample B Male 5.2
Sample C Female 6.0
Sample D Female 3.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
2578 Antisense, RP_040526_02_E09, Mouse strain C57BL/6J (56 days, male) 0.5
2577 Antisense, RP_040526_02_E09, Mouse strain C57BL/6J (56 days, male) 0.2

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