HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.3 nTPM
HPA Brain:30.9 nTPM
GTEx:6.3 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Pig:47.8 nTPM
Mouse:35.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
2529 Female, age 94, left hemisphere 33.1
1911 Female, age 85, right hemisphere 31.8
2148 Female, age 91, left hemisphere 31.3
2621 Female, age 67, right hemisphere 28.4
1898 Male, age 80, left hemisphere 23.7
1855 Male, age 76, left hemisphere 22.5
Dentate gyrus
nTPM: 22.8
2528 Male, age 74, both hemispheres 33.0
1927 Female, age 91, both hemispheres 27.6
2246 Female, age 85, both hemispheres 27.2
2010 Male, age 76, both hemispheres 20.1
2530 Female, age 94, left hemisphere 15.4
2531 Female, age 67, both hemispheres 13.6
Entorhinal gyrus
nTPM: 30.4
1938 Female, age 85, left hemisphere 40.5
1787 Male, age 76, left hemisphere 33.2
2613 Female, age 94, left hemisphere 32.7
2117 Female, age 91, right hemisphere 31.6
2764 Male, age 80, right hemisphere 23.2
2686 Male, age 75, right hemisphere 21.1
Hippocampus, CA1
nTPM: 26.6
2527 Male, age 74, both hemispheres 39.9
2082 Female, age 91, right hemisphere 29.5
1873 Female, age 85, both hemispheres 29.1
2749 Male, age 80, left hemisphere 18.5
2045 Male, age 76, both hemispheres 15.8
Hippocampus, CA2
nTPM: 26.9
2249 Male, age 74, both hemispheres 33.4
1940 Female, age 85, left hemisphere 31.7
2113 Female, age 91, right hemisphere 31.3
1963 Male, age 80, left hemisphere 25.3
1892 Male, age 76, both hemispheres 20.1
2437 Female, age 94, left hemisphere 19.6
Hippocampus, CA3
nTPM: 23.5
2436 Male, age 74, both hemispheres 34.3
1891 Female, age 85, both hemispheres 29.4
1867 Male, age 76, both hemispheres 22.0
2861 Female, age 67, both hemispheres 20.1
2137 Male, age 80, left hemisphere 19.8
2620 Female, age 94, left hemisphere 15.5
Parahippocampal cortex
nTPM: 30.5
2250 Female, age 67, right hemisphere 38.1
1933 Female, age 85, both hemispheres 37.1
2692 Male, age 74, both hemispheres 36.1
2622 Female, age 67, right hemisphere 34.3
2693 Female, age 94, both hemispheres 32.0
1990 Female, age 91, right hemisphere 31.6
1850 Male, age 80, both hemispheres 27.1
2018 Male, age 76, both hemispheres 25.3
2245 Female, age 91, both hemispheres 25.0
2532 Female, age 72, left hemisphere 18.5
Perirhinal gyrus
nTPM: 30.9
1847 Female, age 91, left hemisphere 37.8
2521 Female, age 94, right hemisphere 30.9
2848 Male, age 76, right hemisphere 29.5
1841 Female, age 85, right hemisphere 28.8
1794 Male, age 80, right hemisphere 27.8
Subiculum
nTPM: 28.2
2619 Male, age 74, both hemispheres 42.8
2729 Female, age 91, right hemisphere 34.4
1977 Female, age 85, both hemispheres 27.4
2438 Female, age 94, left hemisphere 26.2
2042 Male, age 76, both hemispheres 20.1
1901 Male, age 80, both hemispheres 18.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.3
Samples: 197

Max nTPM: 27.2
Min nTPM: 1.3
Std nTPM: 3.7
Median nTPM: 5.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 27.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 22.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 18.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 16.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 15.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 14.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 14.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 14.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 14.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 13.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 13.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.8
FF:10153-102I9 76 years, female 39.5
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.8
Pig sample Sample description nTPM
Subiculum
nTPM: 47.8
Samples: 4

Max nTPM: 50.4
Min nTPM: 44.0
Sample A Female 50.4
Sample B Female 50.2
Sample C Male 44.0
Sample D Male 46.7
Dorsal hippocampus
nTPM: 41.2
Samples: 4

Max nTPM: 49.1
Min nTPM: 36.7
Sample A Female 39.9
Sample B Female 36.7
Sample C Male 39.0
Sample D Male 49.1
Entorhinal cortex
nTPM: 45.0
Samples: 4

Max nTPM: 53.7
Min nTPM: 37.2
Sample A Female 37.2
Sample B Female 53.7
Sample C Male 48.9
Sample D Male 40.1
Ventral hippocampus
nTPM: 39.8
Samples: 4

Max nTPM: 41.3
Min nTPM: 35.6
Sample A Female 35.6
Sample B Female 41.2
Sample C Male 40.9
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 38.8
Min nTPM: 33.7
Sample A Male 38.8
Sample B Male 33.7
Sample C Female 34.7
Sample D Female 36.3
Hippocampal formation
nTPM: 30.3
Samples: 4

Max nTPM: 38.6
Min nTPM: 25.4
Sample A Male 38.6
Sample B Male 28.2
Sample C Female 25.4
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68743943 Antisense, RP_050203_01_H07, Mouse strain C57BL/6J (56 days, male) 0.4

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